SimpleSearch - Line and FST details


Line specific information

 
Line ID 095A05
Vector Used pAC161
Line Availability available as T3 set from NASC (N409029)
Segregation Analysis 100:100:70
Confirmed for Hit At1g78980
Parent of DUPLO pair none
Parent of pair(s) 626, 3670, 3694, 85591

Gene hit At1g78980

 
Sequence (A. th genome BLAST matches underlined) 
>33-012025-strizhov-A5-8409
NTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACATCAGAATCCATGCTTACAGC
ACAGATGTGCTTAATCAATTTCTTTGTTCTCACTACATGCTTTGGAGATTTTTCCTTTGA
CATACCGAGTAGGGCACGTTTCCATCGAGTACGACTTTCAAAGGAGCCTCTATATCAAAT
AGCAGATTACAATTTGTTTCTTGCATAATAAGTAATTAAAATAACAAACATTTGTTTGAA
CTTACAGATTGGCAATGCCGGGGGGGAGCTGACAAGGTAGGTACCCTTCGAGATTGCTTC
TGCTGAGATCACTGCACTAGTCACCATATTCAAAAACCAAAACTGTCATTGTCTGATTAC
TTGGTGAACTACTGTAAACGAGACATTATAACGAAGACTCTCACAAAGTAGAGAGAGATT
TGAGGTTGCTTACTAGATAACCGCAAGATCCACCTATGGGATCCTCCCTATAGGAGTCGC
NTTNAACTGAAANCCTCCCTATAGTGAGTCGTTTTAC
GenBank Accession BX890744 [GenBank]
Graphic View Graphic view of gene At1g78980
Predicted Position of Insertion Chr1:29710438 - go to primer design
BLAST e Value 2e-98
Hit Clone Code (BAC ID) YUP8H12R
Hit Gene Code At1g78980 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation STRUBBELIG-receptor family 5
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37