SimpleSearch - Line and FST details


Line specific information

 
Line ID 095A11
Vector Used pAC161
Line Availability available as T3 set from NASC (N2013120)
Segregation Analysis 7:2:1
Confirmed for Hit At3g27020
Parent of DUPLO pair none
Parent of pair(s) 95735, 95741, 95746, 95750, 95753, 95755, 95757
Note

Gene hit At3g27020

 
Sequence (A. th genome BLAST matches underlined) 
>04-K028183-022-095-A11t-8409
GATTATACTCGATTCCAACTCTGTTTCCACCGTTGAAGTAACGAGTGACATTGTCATGTA
TGGGATCCTCCCTATACTGAGACCTATTACTCATTACCCTTTCCTTTTCTCCTCACTGAC
ATCCTTTCTTCATACTGATCCCTGTATGTTTTCCAGCTGCCGGAGTTCTCATGACAGTGA
ATCTTCCGACATACCGCTGATGAACACAACACAATATGAAGTGTTTCTGACGGACCGGAT
GCCCCTTCGCTTTACGATTGCTGGTTATGTGGGGCTTGAAACTGTCTGGTTGCCACGTGC
GGAGTATCCCTTCCCGCCGCATGGGTGGAAGGGAAGGGTCGGGATGGGGGGGGGAAAAAT
GGGGGAGACTCAGAGGAGATAGGGTTCACAATAGGGAGGATCCCTGACAAGGCGGTGAGT
AGGGAANATTAGTGGTGGAGGAGGAGGAAGGT
GenBank Accession FR802849 [GenBank]
Graphic View Graphic view of gene At3g27020
Predicted Position of Insertion Chr3:9962755 - go to primer design
BLAST e Value 2e-08
Hit Clone Code (BAC ID) MOJ10
Hit Gene Code At3g27020 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation YELLOW STRIPE like 6
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g58480

 
Sequence (A. th genome BLAST matches underlined) 
>04-K028183-022-095-A11t-8409
GATTATACTCGATTCCAACTCTGTTTCCACCGTTGAAGTAACGAGTGACATTGTCATGTA
TGGGATCCTCCCTATACTGAGACCTATTACTCATTACCCTTTCCTTTTCTCCTCACTGAC
ATCCTTTCTTCATACTGATCCCTGTATGTTTTCCAGCTGCCGGAGTTCTCATGACAGTGA
ATCTTCCGACATACCGCTGATGAACACAACACAATATGAAGTGTTTCTGACGGACCGGAT
GCCCCTTCGCTTTACGATTGCTGGTTATGTGGGGCTTGAAACTGTCTGGTTGCCACGTGC
GGAGTATCCCTTCCCGCCGCATGGGTGGAAGGGAAGGGTCGGGATGGGGGGGGGAAAAAT
GGGGGAGACTCAGAGGAGATAGGGTTCACAATAGGGAGGATCCCTGACAAGGCGGTGAGT
AGGGAANATTAGTGGTGGAGGAGGAGGAAGGT
GenBank Accession FR802849 [GenBank]
Graphic View Graphic view of gene At5g58480
Predicted Position of Insertion Chr5:23642450 - go to primer design
BLAST e Value 5e-21
Hit Clone Code (BAC ID) MQJ2
Hit Gene Code At5g58480 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation O-Glycosyl hydrolases family 17 protein
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 092A07
Other FSTs Supporting this Hit FR802850 [GenBank]


Last Updated on 10.06.2021 13:37