SimpleSearch - Line and FST details


Line specific information

 
Line ID 097C10
Vector Used pAC161
Line Availability available as T3 set from NASC (N409250)
Segregation Analysis 50:48:36
Confirmed for Hit At1g53240
Parent of DUPLO pair none
Parent of pair(s) 3916, 3992, 8332

Gene hit At1g53240

 
Sequence (A. th genome BLAST matches underlined) 
>75-012023-strizhov-C10-8409
TGATCCATGTAGATTTCCCGGACATGAAGCACTTTACAATTGAATTATGCTACTCTTATA
TGCTTTGCTCTCTTGTGGGCAAGCTGTTGTCGATGCCAGAGCTAAGGTACTTAGATAATC
CCAGTATGACATGTTGAAAATATCGTGACGGGTCACTACGTGGCTTTTTTGGACACCAGC
TGGAATGATTAGCGAGATCAGCTCCTTCAAGAGCTCTGGCCAAGTTATCATCGCCCATGT
ATCCAACGACCTATCCAACACAAGTACATAGCACATGAATCAGTATAGCGAACAAGTCAC
AAGTCTAATAAGCCAAAATGATACATCTCTGTTCAAAATCTGAACGAGGAAGCAATTCAA
ATCAAAAAGGGATTTTGTTTGTAATACCTCAGATCTGGTGTTGATGTGACCAACATCAGC
AGCAACTCCAGGAGTGTTAGCGATATCGTAGAGGGAGAGGGAAGAGACAAGAGGATTAAG
CTTCATGAGGAGAGCAAGAGGCTGACCAATTCCACCGGCGGCACCAAGGATGGCGACTTT
ACGCTCGGGGACGGAGCCGGAGGAAAAACTACGGGAGATAACCGCCTGCTTTCCGTACGC
CGAGACCGGCCGACCCCCATCCGCCCCCTTCCGCGGACTGAAAACACTACGGGAACCCGC
CCCTAAGGACACCTACCCCCCCCCCCTCCTCTACCACTCCACACCACACCCTCCTTACGA
CAAACCACCAACTTACTCTTCAACCCTTCTCCACTCCCCCTACACCTCCACCTCCCCTCT
ACCCCCCTCATCTTCTATCTTTCTTCTATCCTTCCAAACCTGACCACCCACGCGCGCCGG
CTACCCAGTCACCGCCTCCACCCCGACCCTGCTCCCACCACAGGTCGCCCGGCCCACGCC
CCCCTAAAACACTCCCACTCCCTCCAAAATCTCCCCACAA
GenBank Accession AL755396 [GenBank]
Graphic View Graphic view of gene At1g53240
Predicted Position of Insertion Chr1:19856232 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F12M16
Hit Gene Code At1g53240 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Lactate/malate dehydrogenase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37