SimpleSearch - Line and FST details
Line specific information
| Line ID | 098G07 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N409391) |
| Segregation Analysis | 50:16:10 |
| Confirmed for Hit | At3g10270 |
| Parent of DUPLO pair | 11662 |
| Parent of pair(s) | none |
Gene hit At3g10270
| Sequence (A. th genome BLAST matches underlined) | >55-012075-strizhov-G7-8409 TTTGATCCATGTAGAATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGTAGA AGGAAGAGTAAAATACCACTGAAGTGAAACGTCAACGGTGGAGCCATTTATCTCTTTCCG GAAACCCAGCACATCATGAAGCGGTTTCTGAACAAAACGAATTGTAAATTCATATTTTCG GAAGGGAAAAGTAATAAGGATGACCTATAACACCAGAGACCTAAATGCATAAGAGCTAAC ATAATAGAGATTAAGTTTACAAAGGTTCCATGCTCATGCTAAATAGAGCCCTAAAGAATA ATGAACAGACAACACATCTTACCATCAAGTAAGCTGAGAAGGAAAAGTATTAGTACCATC CCCATTGCATTTTGTTTCACAAAACCCATTCCAATTTAATTGCCACTATTTTAAGTCTAT GGGATCCTCCCTATAGGAGTCGTTTTACCTCAATNTCTCTCTGNCTAACCTCGGCTTGAA ATCTTTTTCAGATTTTGATTGTTCCTTTTTCTTTTTCCTGTTTGCCTCCAGAGTTGCAGT TGTTACTGGTTCCAACAAAGGGATTGGGTTTGAGATTTGCAGGCAACTATGGGATCCTCC CTATAGTGAGTCGTTTTACCTAANNNNCNNGNNGGNNNNNAGNNGNNGGCGGTNCNTATT TCTTGAGGGGTCTTTTAGCCGGGCCGGGACCTTGTAAACTTATCCCTATATGGCACCCCT AAGCCCTGAGGGTCTTGGGGCTAAAAGGCCTCTTTTTCTTTTCCTTTCAAAAAATGAGTT TACATTGG |
| GenBank Accession | AL755515 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:3176621 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F14P13 |
| Hit Gene Code | At3g10270 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | DNA gyrase subunit B |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit F5E6
| Sequence (A. th genome BLAST matches underlined) | >55-K012117-022-098-G7-35St TTGCGTAAGGGATGACGCACAATCCCCTATCCTTCGAAGACCCTTCCTCTATATAAGGAA GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG GTTTAAACTATCAGTGTTTTGCATTTAATTTGTCTATATGTTTATATTAGTGTATGTTTC AATATTGAATTTTTTTCTCCCATGTATAAGATTGATGACCAATATTATATATGTTAAGAG AGTGATATTAAACATATGAATGAAATAGTAAGATTAGTGTGCTTTTAACAAACAAACAAC AAAAAACTATGGGATCCTCCCTATAGTGAGTCGTTTCACTCATGGGATCCTCCCTATAGT GAGTCGTATTACTC |
| GenBank Accession | AL755516 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:2010189 - go to primer design |
| BLAST e Value | 3e-63 |
| Hit Clone Code (BAC ID) | F5E6 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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