SimpleSearch - Line and FST details


Line specific information

 
Line ID 099A02
Vector Used pAC161
Line Availability available as T3 set from NASC (N409410)
Segregation Analysis 50:45:33
Confirmed for Hit At4g14096
Parent of DUPLO pair none
Parent of pair(s) 89798, 89810, 89821, 89831, 89840, 89848, 89855, 89866, 89870, 89873, 89875, 89877

Gene hit At4g14096

 
Sequence (A. th genome BLAST matches underlined) 
>09-012074-strizhov-A2-8409
TGATCCATGGTAGATTTCCCGGACATGAAGCACTTTACAATTGAATATATCCTGCAAATG
TGAAGACTCTCTATCTATCTTCCACACTCTTCAGGTTTGTTTTCATCATGAAAAACAACT
TGTAATCTTTTTAACATTGTTCAAGGATTTGAGTTAGTGATTGCAATTGAGTGATGATAA
TCTATGGGATCCTCCCTATAGTGAGTCGTATTACTC
GenBank Accession AL755533 [GenBank]
Graphic View Graphic view of gene At4g14096
Predicted Position of Insertion Chr4:8125470 - go to primer design
BLAST e Value 6e-62
Hit Clone Code (BAC ID) FCAALL
Hit Gene Code At4g14096 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box/RNI-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At4g39235

 
Sequence (A. th genome BLAST matches underlined) 
>09-012118-strizhov-A2-35St
TGACGTAAGGGATGACGCACAATCCACTATCCTTCGAAGACCCTTCCTCTATATAAGGAA
GTTCATTTGATTTGGAGAGGACAGGGTAGCCCGGGGATCAAATTGTCGTTGTGCCCGCCT
TCGGATATAAACTATCAGTGACTGACCACCGATACTAACTATAATGAGTCGTATTACAAG
TTCAACAACACATCCAAAACAATAAAGTACACAATCAAATTGTCAAAGTAGAACCCTAAA
CAAAAAAAACTCAACGATTCCAAACAAAATTCTTTCAAATCCTGAACTGAACATCACCAT
CCATTATCCGTATCCACCTAACTACAAGCAAGGAAAGAGATCGAAGAACAAGAATAAGAG
CTTCATGATTAATTTTACCTCTACGAGATCTTTCAATTCGTCTCCTTCTTCTTCTTCTTC
TAAACGAGAAGAGGAGGTTCTATGGGATCCTCCCTATAGTGAGTCGTATTACTC
GenBank Accession AL755534 [GenBank]
Graphic View Graphic view of gene At4g39235
Predicted Position of Insertion Chr4:18268370 - go to primer design
BLAST e Value 5e-105
Hit Clone Code (BAC ID) T22F8
Hit Gene Code At4g39235 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification TS2TE (5')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37