SimpleSearch - Line and FST details


Line specific information

 
Line ID 100G09
Vector Used pAC161
Line Availability available as T3 set from NASC (N409585)
Segregation Analysis 50:10:8
Confirmed for Hit At4g21910
Parent of DUPLO pair none
Parent of pair(s) 86192, 86210, 86288, 86344

Gene hit At4g21910

 
Sequence (A. th genome BLAST matches underlined) 
>71-012073-strizhov-G9-8409
TGATTGGGATCCCTCCTATAGTGAGTCGTATTACTCAATCGAATATATCCTGCTCAGCTG
CTGATCCATGTAGATTTTATTCGCAGATTCTTGTTCTTCTTGCTGGTTTGCTCGAAAATC
CTGCTCGCTCTCTAGATTCTCTTTCCATCTGGTAAGTCCATTAATTAGTTAGTAACTTGA
TTCTTGATTCTATATCATTTTCTTAATCACTTATACTTTTTTTTTTGGGTTTAAAGGGGA
AGGAACCCCTAAACCTTCTTTTTAATCAAACAATTTTTTTTTGGTATTTTTGGGGCGGGG
GGGAAATTCAACCATTACCATCCAGGGCCTTGGCGGGTTTAAAGGCGGCGGAAGGGTAAG
TATTGGTTTCTAAACAAATTCAAAATTT
GenBank Accession AL755669 [GenBank]
Graphic View Graphic view of gene At4g21910
Predicted Position of Insertion Chr4:11627021 - go to primer design
BLAST e Value 9e-73
Hit Clone Code (BAC ID) T8O5
Hit Gene Code At4g21910 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation MATE efflux family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL755669 [GenBank]


Last Updated on 10.06.2021 13:37