SimpleSearch - Line and FST details


Line specific information

 
Line ID 100H11
Vector Used pAC161
Line Availability available as T3 set from NASC (N409599)
Segregation Analysis 42:4:3
Confirmed for Hit At5g03350
Parent of DUPLO pair none
Parent of pair(s) 7286, 7288, 8395, 8417, 90586

Gene hit At5g03350

 
Sequence (A. th genome BLAST matches underlined) 
>88-012073-strizhov-H11-8409
GTGATCCATGTAGACTTTCCCTGACATGAAGCACTTTACAATTGAATCCCGACATGGTTA
TCATTAATGTCTCCAAAACCTTTGTACTGAAAAACGTCGAATTCGACAGCAAAGATGTGG
TTTTTGGGGTTGCCATTGTTGGTTTTGTTGAATATCCCGAGGTATCCAGCGGGTCCAGGA
CCGTCACTTTCAATGGAAGGGACGACAACAAAAGCATGGCCGTGACCAGGGGCGGGTTTG
ATGCGAGTAGAGATGGACAAAGTGAAAGAAGTTTCAAATGGATAAGGAAAATAAGAGTTT
GAAGAAGGCTTGAAAGGGACTGGAGTGGACCAAAGACTTTGGCCGTGAGAGAATGGGTTC
TCGTCTCGTGTCATGGAGAGAGCTCCGGAGCGGCTGACTCCATCAAAAGCAGGACCGAGC
TCAGCGTCTCCAAGGAAGACCAACTCTGAGGCTTTGAGGTTGAGGTTGAGGCTGCCGGCG
GAAGTGGAGAGAGCTATTCCCAGCCCAAGAAACCCCGTGTTATGCATCCTCTCTGCCGTT
TACAGCATCGCTCAATTCTTTAATAACATGTTATAATAGGGAAACTAAAAAGCTGAAGTC
AATTAACTAAACCATTCCTTACTTTCCTTCTATATAATCCGTTTGTTTGGTTATCGTATC
CCTTATTTTTATTAATCATGTAT
GenBank Accession AL755679 [GenBank]
Graphic View Graphic view of gene At5g03350
Predicted Position of Insertion Chr5:816140 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F12E4
Hit Gene Code At5g03350 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Legume lectin family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL755679 [GenBank]


Last Updated on 10.06.2021 13:37