SimpleSearch - Line and FST details


Line specific information

 
Line ID 101D04
Vector Used pAC161
Line Availability available as T3 set from NASC (N409640)
Segregation Analysis 50:33:26
Confirmed for Hit At5g63120
Parent of DUPLO pair 2296
Parent of pair(s) none

Gene hit At5g63120

 
Sequence (A. th genome BLAST matches underlined) 
>28-012072-strizhov-D4-8409
AGATTTCCAAAATTCTGCTTCGTGAGAGATACACTATCTATGGGATCCTCTCTATAGTGA
GTCGTATTACTCACTTCTGGGATCCTCCCTATAGTGAGTCGTATTACTCAGAGAGGGATA
TATCCGTTGAAGGTCGTGATGTTCCTAAGCCGATGAAGATGTTCCAAGATGCTAACTTTC
CAGGTATTTTGATTGGATTGGTCATAGAGTTTCCAGTTCATTTATATCTAATTTGGGTTC
TTAGTTTAATGGTTCCTTTTATCTGATAGATAACATCCTTGAAGCAATTGCTAAATTGGG
ATTTACTGAGCCAACACCTATACAAGCTCAGGGATGGCCGATGGCGTTGAAGGGTAGGGA
TTTGATTGGTATTGCTGAGACTGGCTCTGGTAAGACATTGGCTTACTTGTTACCAGCATT
GGTTCACGTTAGTGCACAACCTCGATTAGGTGAGTATTACAGCACTATGTGATATTCTGA
TTTAAGCTGCATTCATTTTTCCGGCAACTTTTTTATTTGCATTGTTGGGGTGTAATATAG
GTCAGGATGATGGCCCCATTGTGTTAATATTAGCTCCCACAAGAGAACTATGGGATCCTC
CCTATAGTGAGTCGTATAACTC
GenBank Accession AL755709 [GenBank]
Graphic View Graphic view of gene At5g63120
Predicted Position of Insertion Chr5:25321607 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MDC12
Hit Gene Code At5g63120 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation P-loop containing nucleoside triphosphate hydrolases superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CU589291 [GenBank]


Last Updated on 10.06.2021 13:37