SimpleSearch - Line and FST details


Line specific information

 
Line ID 103E12
Vector Used pAC161
Line Availability available as T3 set from NASC (N409852)
Segregation Analysis 50:47:46
Confirmed for Hit At2g17000
Parent of DUPLO pair none
Parent of pair(s) 2689, 94872, 94873

Gene hit At2g17000

 
Sequence (A. th genome BLAST matches underlined) 
>93-K012379-022-103-E12-8409
NTGATCCATGTAGATTTCCCGGACTGAAGCACTTTACAATTGAATATATACTGATATAGC
ACGCTTCAAGGCAACTAACTTACTACTATGGGATGCCTCCCTATAAAGACACCGGAATAC
ACAACTTATCTGCACTGGCAGCAACCACTGGTAACAGGAATACCAGATCGAGGGATGTTG
GCGGAGCTACAGAGTTCTTGAAGAGGTGGCCTAACTACGGGTACACTATGGGACCCTACC
TAGGGGGAGAGGAACCAATCACCAACATTGTCAGGGTGAATGATGAAGAGGAAGATGATT
GACTCGAAGACGGTCTTGAGAGAGTTCCCAAACATGAAGGCTAATAGTACAACTTGTGAA
GCTAGAAATAAAAGATACTTGGAAGTACCGATTTCTATAAAGATCAGCCATATGACTATG
ATGACAATGGCCGGGAGAAAACTAATCATGTGATGGGAGTTTGTCACTGCTGTTTTGGAG
TCATTGAGTGTTAAAGCAAAGGCTCTTCTCTCTTCTGAAGCATTTACCCTATTTAGCAGA
AACAATACTTTAGTGGCGCTATTACCCTAATCTAAGAATCAACCTTTTCTTTGAACAAAA
AAAAGGGCCCCCCACCCCCTTCAAGGGTGATTAACAAATCTTTTTGGGCAACTAAGGCGC
CCCTCAAAAGAAACAATT
GenBank Accession AL755924 [GenBank]
Graphic View Graphic view of gene At2g17000
Predicted Position of Insertion Chr2:7389735 - go to primer design
BLAST e Value 2e-107
Hit Clone Code (BAC ID) F6P23
Hit Gene Code At2g17000 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Mechanosensitive ion channel family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37