SimpleSearch - Line and FST details


Line specific information

 
Line ID 103F10
Vector Used pAC161
Line Availability available as T3 set from NASC (N409862)
Segregation Analysis 100:69:50
Confirmed for Hit At3g21370
Parent of DUPLO pair none
Parent of pair(s) 6256, 6258, 6263, 10579, 10586, 70277, 70357, 70492, 70565, 70627, 70637

Gene hit F15D2

 
Sequence (A. th genome BLAST matches underlined) 
>78-K012379-022-103-F10-8409
AGTATCTGTACTCTTATAATGCGTCTTGTCTCAATGATTTGTAATTACATTATCTAACAT
TAACGTTGGTTATAATGTGGGATCCAAACCCCTGATACCACGCACACATGCTGGTACATA
ACCGGACAAATACTTGCGTCTATGGGATCCTCCCTATCGTGTGACTATCATTGCCATTTG
ACTTTTACGTACGTATTAAATCAACCATAACTTCGGGCAAGCATTAGTAATTTACTAAAT
CTATGGGATCCTCCCTATAGTGAGTCGTTTAACTC
GenBank Accession AL755938 [GenBank]
Graphic View Graphic view of sequence AL755938 of line 103F10
Predicted Position of Insertion Chr1:10366442 - go to primer design
BLAST e Value 2e-39
Hit Clone Code (BAC ID) F15D2
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At3g21370

 
Sequence (A. th genome BLAST matches underlined) 
>78-K012500-022-103-F10-35St
TGACGTAAGGGATGACGCACAATCCCCTATCCTTCGCAGACCCTTCCTCTATATAAGGAA
GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG
GTTTAAACTATCAGTGTTTGAAAAAGTGCAAAGGTGGTAAAATCGGAATCGCTCATAGTC
CAGCTTGGTTTGAACCCGAAGATGTGGAAGGAGGTCAAGCGACTGTAAACCGTGTGCTTG
ATTTCGTCATTGGCTGGTTAAAAACACAAATCATCAACTCTTGATATATTTTAATGTTAT
TCTTGATTATATATATACATAATTGCAACATTGTGTTTTTCTTTTTCTTTAGGCATTTGG
ATCCTACCACGTTCGGGGACTATCCTCAGTCTATGAAAGACGCGGTTGGATCTCGGTTGC
CAAGATTTACCAAAGCCCAAAAGGCAAAACTGAAAGATTCGACAGACTTCGTGGGAATAA
ACTATTACACTTCCTTCTTTGCAAAGGCTGACCAGAAGGTTGATAGTCGGAACCCGACTT
GGGCTACAGATGCTCTATGGGATCCTCCCTATAGTGAGCGNNTTNC
GenBank Accession BX890749 [GenBank]
Graphic View Graphic view of gene At3g21370
Predicted Position of Insertion Chr3:7525589 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MHC9
Hit Gene Code At3g21370 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation beta glucosidase 19
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37