SimpleSearch - Line and FST details


Line specific information

 
Line ID 103G09
Vector Used pAC161
Line Availability available as T3 set from NASC (N409873)
Segregation Analysis 50:37:16
Confirmed for Hit At5g28350
Parent of DUPLO pair 12116
Parent of pair(s) none

Gene hit At5g28350

 
Sequence (A. th genome BLAST matches underlined) 
>06-K117966-0022-103-G09C-8409
TTGTAATCATCAATAGAGTAGAACATCCTTTCGGTTTATGCTGTCATTCTAATTGCCTTT
TGTGGTCTCCGTAGATGTCTTATACTGAGAGGAAATGGGGAGCTTTCACTTCTTGATTTG
GTTGATGGACGAGAGAGGGAACTTACAGACTCAGTTGAACTATTTTGGGTGACATGTGGT
CAATCGGAGGAGAAGACAAATCTTGTCGAGGAAGTTTCTTGGCTAGATTATGGACACCGA
GGAATGCAGGTAATTCCTCTGCTTCAAAGCTGCTTGTTATGCTCACTTTTCTTCTTCTTC
TTTTTTTTTTTTTTTTTTTTTTTTCCCCGTAAAGGGGTGCCCCGCCCCCAAATTTTCGAA
AAAAACCCCCTTTTTGAACCCCGGCTTTTTTTTTTTTTTTTTTGGTAAAACCCCAAAATT
TCTATTTGGGGGGTTGGGTCCCCTTCCCGGGGGAAAAACCTTTTTTGGAAAAAGATTTCC
CGGCGGGTTTCCCGGCAAAAAAACCCCTTTTCCCCGCCCTTGGGAACCTGGCCTTTTTGT
CCAAATTTTAATGGCCGGAAACCCCTTT
GenBank Accession HG968734 [GenBank]
Graphic View Graphic view of gene At5g28350
Predicted Position of Insertion Chr5:10323470 - go to primer design
BLAST e Value 2e-180
Hit Clone Code (BAC ID) F21B23
Hit Gene Code At5g28350 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL755952 [GenBank]


Last Updated on 10.06.2021 13:37