SimpleSearch - Line and FST details
Line specific information
| Line ID | 106A06 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N410086) |
| Segregation Analysis | 50:49:33 |
| Confirmed for Hit | At3g51550 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3329, 3344, 96187, 96191, 96200 |
Gene hit At3g51510
| Sequence (A. th genome BLAST matches underlined) | >41-K012378-022-106-A06-8409 NTGATCCATGGTAGATTTCCCGGACATGAAGGACATGGCAACAAATGAATTTGTTCAAAA TGGTGACATTACCATCAGCTTCAGACATTCAAACCGCAGGATGGCATATCGAATTCTTTG TGGATTCATATCTTTCACAGGGGCAAATAAAAGAGAGGACAGCTGATCATCGAATTTCAG GCACTTACTCGTTGGAACATGGCATATTGTTGAAATTACAAACAAAATCTATGGGATCCT CCCTATAGTGAGTCGTTATACTCATTTGTAAATGCAGAATTATATTCAAAGTATATGTGG AGACAACAATCATCACTGTATGAGTTGCAGAATCACACAAAAGGATTTTAAAGAAAGCCA TCTCTTTTATCTTGTTCTTGAGCTTCCTTATTAGCAGCTTCAACGGATTTGAACCATAGG AACACCTGAACGCAAAAAAACCATTTTTTCAGCTGATACAGATCAAATGGATAAAAACGA AAAGAGAGAGACAAGGAACTCACAGAAGTGGGGATTCCAGTAAGAGCAAAGAATCCAAGC ACAGGAGTATAAAAGATGCTGTCAGATTCCAAGATCCCGAAAACTGGATTCTTGCTTGTG TACTCGAAAACAGAACAAATCTACAGTGACCAAACGATGCATAATTAAGAATACATTCTT TGGTATGAGATTCAGCCATGCAAACAACAAAAGGAGTGGAAGAAGAGAAAAGAAGAAAG |
| GenBank Accession | AL756143 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:19110131 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F26O13 |
| Hit Gene Code | At3g51510 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | transmembrane protein |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | unknown |
Gene hit At3g51550
| Sequence (A. th genome BLAST matches underlined) | >41-K012499-022-106-A06-35St TGACGTAAGGGATGACGCACAATCCCCTATCCTTCGAAGACCCTTCCTCTATATAAGGAA GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG GTTTAAACTATCAGTGTTTGAAAGACTATCAGTGTATAGACCTCGCGGTTGAATAAACAT CCACAGGAGCAACATAAGTAGGAGTCCCCGTAGGATACTTAATCGTCATGTTGGGATCAG CAGTCTCTGGAATACCAAGTCCTGCACCAAATATATAAGGCTGATCATCATACCACGACC TATACAAACCCGTATCCGCGGAAGGCGAGATATCATTCCCTCCAACATTGAGCCTATACA CATTCTCAAGAGCAGTACTGTTATCAATAGTAACAGAGCCAGATGATCCAACCATAGTCA AAGTCCCATCAGTACTACTATACATATCAGGCATTGAAGTAACCTCAATCCCATTAACAA ACGCATACGCATTAGACGGAGCTGATTCCGGTGTAAACGTCATGTTCAACGTTCCACCTT CAACGTTGACAACAAACTCCTTGATGATGAAAGCGTAAGTCAACGCCTNCGCCGTCTGAG AAGCACTGAAATTCTTGAGAAGAGTGTAAGGACCAAAGGAGACGGAGAATAACGAGTTGG TAGCGTTGAGACCGTCGTACGAGTTTTGGTAGAAGTAGAGACGCACGAATTTACGACCTG ATGCTACAGGGAAAGTGTTAGTGAAAGGAGATCGGAAACTCTCGCCGTCTGTAAAGAACT TCGGGAACGAAAGATACTGGGGTACGCTTGGGAATGGTTAGAGGCTTCAGAGGAGA |
| GenBank Accession | AL756144 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:19119684 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F26O13 |
| Hit Gene Code | At3g51550 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Malectin/receptor-like protein kinase family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
