SimpleSearch - Line and FST details


Line specific information

 
Line ID 106E07
Vector Used pAC161
Line Availability available as T3 set from NASC (N410135)
Segregation Analysis 50:40:31
Confirmed for Hit At5g39480
Parent of DUPLO pair none
Parent of pair(s) 96381, 96383, 96385

Gene hit At5g39480

 
Sequence (A. th genome BLAST matches underlined) 
>53-K012378-022-106-E07-8409
NTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGCATAT
ATTCTTTTTCGACCTTTTTCCCCTGCTAGTGGGATCCTCCCTATGGTGAGTCGTATTACT
CAGCTTTGTTATGGGCATTGAGAAGAGTTGCATTGTACTTCATCTCGATGTTGAGCCGAG
GCAAAAGAAGAGTTCGTGCAATGAGATTGAGAGAGGAGCCTCAAGAGAGGAGGGAGAGAT
TCCATTTTGGATGCTCGCTTTTAGCAGATAGAACTTGTTTGATCAATATCGTGACAAGCC
ATGTGAGTTTACATGTGGCGGAACCATTCTTTGATATGTTATTTGCCACATTGAAATATG
TCGAAGCATTGCCTGGGTGAACGCAGAACCTTGCTGCTTAAAATGCACAAGTTTGGTGGA
ATTGGAAAAAGCATGAATGAGGAGGAGGATGCTCATTTTTGGGACAGCTCCCAAGCCAGG
CAAGCTACACGCGATGTCGTGAACATCATGTGCTGACAGTCCAATTGACGACAAAGCACC
CCATGGGAGTTAACCACACGGATGACTCGAATGTATTTATGGAAGTACTCGGAATCCACA
TTTAAGAGGAAAATAGCCCCGGGCCTTACCAAATTCAGACTTTGAAATCAAGGAACGCAG
CCTTTGGGATTCTGGGTTAAGGTTGGAATCAAAAAGC
GenBank Accession AL756186 [GenBank]
Graphic View Graphic view of gene At5g39480
Predicted Position of Insertion Chr5:15802722 - go to primer design
BLAST e Value 4e-38
Hit Clone Code (BAC ID) MUL8
Hit Gene Code At5g39480 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37