SimpleSearch - Line and FST details
Line specific information
Line ID | 107A11 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N410187) |
Segregation Analysis | 50:27:22 |
Confirmed for Hit | At5g43170 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At5g43170
Sequence (A. th genome BLAST matches underlined) | >81-K012377-022-107-A11-8409 NTTTGATCCATGTAGATTTCCCTGACATGAAGACCTTTACAATTGACATTTGAATCCAAC ACACACAATAATGATTGATTCTTTAAAACTAATAAAAACCTTGTCTCTAAACTTACGCCG TATTTTACAATTAATATTCATCTATGGGATCCTCCCTATAGTGAGTCGTATATACCCAAA AATAATTAGAATGGCCAATTTGGCCACCCACTCTCACTCTTCTTTCTCACGCAACTTCCT CTCTTCTCAAGATTCTTCTCCATACTTCACCTTCTTCTATATATCTCTCTGCTCTCAAAT TAGGTTTTAAATTTTCTATAGCAATGGCGCTTGAAGCTCTTAATTCACCAAGATTGGGCG AGGATCCCTTAAGATTCAATGGCGTTGAGCAGTGGACCAAATGTAAGAAACGATCCAAAC GTTCGAGATCTGATCTTCATCATAACCACCGTCTCACTGAGGAAGAGTATCTATGGGATC CTCCCTATAGTGAGTC |
GenBank Accession | AL756235 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:17331896 - go to primer design |
BLAST e Value | 4e-93 |
Hit Clone Code (BAC ID) | MMG4 |
Hit Gene Code | At5g43170 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | zinc-finger protein 3 |
Insertion Classification | Promoter |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Last Updated on 10.06.2021 13:37 |