SimpleSearch - Line and FST details
Line specific information
| Line ID | 107G05 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N410253) |
| Segregation Analysis | 50:50:39 |
| Confirmed for Hit | At1g50040 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3049, 3127 |
Gene hit At1g50040
| Sequence (A. th genome BLAST matches underlined) | >39-K012377-022-107-G05-8409 TCCACCTTAGGGCTTGCTCTGTTTCTCCACTCCTTGCACCCTCGTCGACATACAAACCCT CAAGTTTTGTTGCGCTTGAGACAGTGAGAACCTGAAATCCGACCCCGATCCTGAATCAGT TCTTGATGATCTGATGCTTGACCACGAAGAAAGATCGAAACTTCCTTCAGAGCTACTCCA AGAAGCAGTCGTAGTCGTAGAAGTGGATCCATCAATGATGAAACTCCCGCCAAGTTTTGT GCTGATCGACGAGGAAGCAGAGACTGCAACAGCGATACCGTCTTTATAAAGCTCGAAACG GTAACCTATGGGATCCTCCCTATA |
| GenBank Accession | AL756298 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:18543672 - go to primer design |
| BLAST e Value | 7e-160 |
| Hit Clone Code (BAC ID) | F2J10 |
| Hit Gene Code | At1g50040 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | formin-like protein, putative (DUF1005) |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At1g44080
| Sequence (A. th genome BLAST matches underlined) | >39-K012498-022-107-G05-35St CCACTACTCCTTCGCAGACCCTTCCTCTATATAAGGAAGTTCATTTCATTTGGAGAGGAC AGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCGGTTTAAACTATCAGTGTCTGAT AATCGAGAGGACGGTGCCTCGATGATATGATCTGATTTGCAGGATCACGATGAGGGTATG ACAGCGGGATGCTATGGCAACCTCCCTATCGACTGCCGTGTTTATCCCCTGACCCGCCAC CCATATCTATGTGATACGGCCTAGAGATGATGCGTAATACTTCGCTCATCTCCGTTGAGA CCGACAGGCGGACCCACCACCACAGTGAACGCCACCTCCTTACTTACTTCACTAAAATGA TAGGGGATCCTCCCTACACTGAGTTCCATGACATCATCCCTTATCCATGTCGCATCAAAG GATGGCTGATTAACATCAGACAATTCTCTGAGTCTATGGGATCCTCCCTATTGTGAGTCT GATTACATACTTGCCACCTAACTCATTACTGACGCCTCCAAGCTTGACTTGCGGCTCCAC GCCATGCTCCCTCTTCGGCATCCGATAACCCCACCCTTTGTTCCG |
| GenBank Accession | FR803166 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:16755713 - go to primer design |
| BLAST e Value | 6e-09 |
| Hit Clone Code (BAC ID) | F9C16 |
| Hit Gene Code | At1g44080 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | F-box SKIP23-like protein (DUF295) |
| Insertion Classification | 5' region |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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