SimpleSearch - Line and FST details


Line specific information

 
Line ID 108C11
Vector Used pAC161
Line Availability available as T3 set from NASC (N410307)
Segregation Analysis 50:45:36
Confirmed for Hit At1g20823
Parent of DUPLO pair 12393
Parent of pair(s) none

Gene hit At1g20823

 
Sequence (A. th genome BLAST matches underlined) 
>83-K012313-022-108-C11-8409
TTTCCCAACTCCTTCTTGCACTAATACCTTTTAGTTTCCCATTTATTTATTAGAAAACTC
TATAATTTAATGCAGATCATTTTAGTGGGATAGTGTTTAGTCTCTTGATGTACATGGTTT
ATTGTAATTTGTAAATGTTGTATGAATTGGAAAATTTAACGATTTGTGTATTTGAACCTT
TTATTACTTTGTGTTTATCAAAAACAATTGCTGAAGTTACCTCTGTTTCATGAAGATTGA
TTTTTAACTTTATATGCATTATATACTATATCATTACATCATTTATATAGTAAGTGTCTC
AATAACTTTACGTTTGTTTAAATTCATGATTTTTTTGTGTGAAACAATACAAATAAATAC
AACGACACGTCGAAACTTGATTTAGAATATAATATAGTATAATTTTCAGGAAATACATGT
AGTGATTAATGGACACTATCCATCGATATCACATTATAGGAAACTCAAGTTAGTCAATTG
TTGTTTTATAATCAACAATTAGTCACTATGGGATCCTCCCTATAGTGAGTCGTTTTAC
GenBank Accession AL756359 [GenBank]
Graphic View Graphic view of gene At1g20823
Predicted Position of Insertion Chr1:7239453 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F2D10
Hit Gene Code At1g20823 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RING/U-box superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL756360 [GenBank]


Last Updated on 10.06.2021 13:37