SimpleSearch - Line and FST details
Line specific information
| Line ID | 108D04 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N410312) |
| Segregation Analysis | 50:50:39 |
| Confirmed for Hit | At3g07380 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 44027, 85158 |
Gene hit At3g07380
| Sequence (A. th genome BLAST matches underlined) | >28-K012313-022-108-D04-8409 NTGATCCATGGTAGATTTCCCGGACATGAAGCACTTTACANTTGACTAATATTCTAAGTC ACTCAATAAACAACACATGGGNCTTTGGTTAACGTTCAATCATTAAAATCAACAAAGTTA TGAATGTTACCTGTAAGTTCTGGCCGGGCCATCACCGGAATAACAAACCTGACTACTCAT AGGCATCAGTTCAATAGTAAACTGAAAATATTCCTCCAAAGATTCCATCACAGACGAAAT CGTCTCTTTCACCGGAACATGTAAAAACTCATCAACATCAACGAAGAACATCCACTTCGT CATGAATACTTATGCAAACAATCATTCACTATCATGAATTGATTATGATAATAACCATCG AATCGTTCTTGATCTCAATTTGGTTTGTGATGAGAATGACTTTGATATTTATAGTGATGA AGGAGGCTATGGGATCCTCCCTAT |
| GenBank Accession | AL756363 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:2361755 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F21O3 |
| Hit Gene Code | At3g07380 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | glycosyltransferase family protein (DUF23) |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit F2P9
| Sequence (A. th genome BLAST matches underlined) | >28-K012334-022-108-D04-35St ACTGAGTAAGGGATGACGCACAATCCACTATCCTTCGCAGACCCTTCCTCTATATAAGGA AGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTC GGTTTAAACTATCAGTGTTTGAGGATACATTCGTTTTATTCACAATTATGCTTCAACGCT GAAGTAGATGTACACTATTTTACTGTTTTTTTTTTCAGCTGAATTTTCTCATCTGCTATG GGATCCTCCCTAT |
| GenBank Accession | AL756364 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:27854411 - go to primer design |
| BLAST e Value | 1e-25 |
| Hit Clone Code (BAC ID) | F2P9 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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