SimpleSearch - Line and FST details
Line specific information
| Line ID | 108E01 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N410321) |
| Segregation Analysis | 50:49:28 |
| Confirmed for Hit | At2g26660 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At2g26660
| Sequence (A. th genome BLAST matches underlined) | >05-K012334-022-108-E01-35St TTGACGAAGGGATGACGCACAATCCACTATCCTTCGAAGACCCTTCCTCTATATAAGGAA GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG GTTTACAGTATATTAATCGTTATGTAACTCTATTACAATTACTTGCTCNATGACAATGTG CCGCAGTGCGTACTATGGTACTCTTTCTTTTGCTAGATATANTGCATGAAAAATCTTCTG TAAGACTGTAACACCACTTTCAAGCAGAGAGAACAATGAAATACATACGCCATTTCGAAA TCTTATGTATTGCATTTTAGCATCTGTGGGTCAATCGGTCTCTGTACTCCTAACTATGGG ATCCTCCCTATAGTGAGT |
| GenBank Accession | AL756374 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:11340810 - go to primer design |
| BLAST e Value | 5e-71 |
| Hit Clone Code (BAC ID) | F18A8 |
| Hit Gene Code | At2g26660 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | SPX domain-containing protein 2 (SPX2) |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At2g25050
| Sequence (A. th genome BLAST matches underlined) | >05-K012313-022-108-E01-8409 TTGATCCATGTAGATTNTCCGGNACATGAAGCATTTACAATTGAATATATACTAGTACGA TCATGGCATTTGAATCACTCCTTATTTTGATATACAATATGACTATGGGATCCTCCCTAT AGTGAGTCGTATTACTCACNGGCATATCTGNTAAAAGCATTTTATGTTATACATAGCTAA TTGTCTTTCCAAGTCAAGAGAGGAGTAACATTCTGTGTTTGTTCAGGTTATATTTTCGGA GATGGGTGCTGGTAAAAAGCTTGCCTCTGTTGATCTGCCACATATGGAGGAAAAAGATGT TTTACCTATGGAAGCATTTGCTAAGGTTCAAGAGATATTTAGTGAAGCTGAATGGTTGGA TCCAAATTCTGATGTTGCTGTGACTGTTTTCAACCAAATAACAGCAGCAAATATCCTTCA AGAAAGCTTGGATTCAGGTTCTCCTCGAAGCCCTGACTCACGTAGCCTATTGGAATCGGC ACTTGAGAAAGTTAAGGAGAAAACCAAGTTGATGATATCGGAAAATATTGTTCCAAGTCC TGATACATCCTCTCCTGAAGAAGAAAACGATCCACGCCCCTCTCTTAAATCTTATGCCGA ATCCGAATTAATTCCTTA |
| GenBank Accession | AL756373 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:10658258 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F27C12 |
| Hit Gene Code | At2g25050 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | actin-binding FH2 (formin 2) family protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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