SimpleSearch - Line and FST details
Line specific information
| Line ID | 108F05 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N410337) |
| Segregation Analysis | 60:59:55 |
| Confirmed for Hit | At3g24503 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 95361, 95363, 95365, 95366 |
Gene hit F21F14
| Sequence (A. th genome BLAST matches underlined) | >38-K012313-022-108-F05-8409 NTGATCCATGTAGATTTCCCGGACATGATCGAACTTGCGATTAGATTATAGTATCGGTGA ATATATCAGAGAACAAAGGACTTCTTTTTTTTTTTTAGTATCAACATGACGTCTTATTAT AACACGAGATATCCTCTATTTTAGATTTAACTGAATATACTATTCCAAGAGTTAAATTCG TTTTAACGTTAACTAACCTGTTGTTGACCCTTTCGACCTATTTTATCATCGAAGACGTGG GGGCAATCAAGGACTTCAACAATGGCTTGTCCACATCTATTGTTATGTAAACTACAAATT AATATCATTTTAAACGACCAATATGTATTCTCTACTCATCCGGAATAGATCAATGAATAA ATTTTAAATCTATATTCTCTAAATTAAGCATACGCTTATCTATGGGATCCTCCCTATAGT GAGTCGT |
| GenBank Accession | AL756388 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:22909639 - go to primer design |
| BLAST e Value | 3e-153 |
| Hit Clone Code (BAC ID) | F21F14 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit At3g24503
| Sequence (A. th genome BLAST matches underlined) | >38-K012334-022-108-F05-35St TGACGTAAGGGATGACGCACAATCCCCTATCCTTCGCAGACCCTTCCTCTATATAAGGAA GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG GTTTAAACTACAAAATAAGTCAACTTTCTCTCGTTCCATTTCTATAAGTTTAATAACACG ACGCTGCGACAGTTACCAATTGCGTAGCAAATCAAATAAAGAGTATTCACTCAGAACAAG ACCCTAAACATTTAATGATCCACTATGTCCACGGGACCACATCAATCAACAATAATAAAA TTAAAATCACCAATAATTTAAAGAAGAAAAAAATGAGTAGTTGTGCAATAAAAAAAAACA TGAGTTGAAGAAGAAACGTACGAAGCCGGTCATGCGAGGCCAAGGACCATGGTCGAAGGC GTAACGTGCAGCGTTAACGGCCAAGTCAACGTCTTCTTTGTCTCCTTCGGCTATTGTTGC GATCACTTCACCGTTCCTATGGGATCCTCCCTATGGAGGNNNNNNCNNCCCCCAANNNNN NNNNCCNNNNNNNNCCCNNNCCCCCCCCAACACCANGGGGCCCNCGNNGAACCCCCCAAT TTTAAAAGGGNAAAGGGCAAGAAAAAAAAGGGGNNCCTTAAACGGCAAGGGGGGCCCTTT CCGGGGGAAAGGTGGCGCGGGAACCCCTATTTGGTTTAATTTTTCTAAATACCATTCAAA AAATGGTATCCGGTTCATGAAAAAAATACCCCCGGGTAAATGGCTTTCATAAATATTGGA AAAAGGGAGAAGTATGGAGTTTTCCACATTT |
| GenBank Accession | AL756389 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:8921990 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | MOB24 |
| Hit Gene Code | At3g24503 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | aldehyde dehydrogenase 2C4 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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