SimpleSearch - Line and FST details


Line specific information

 
Line ID 109G04
Vector Used pAC161
Line Availability available as T3 set from NASC (N410444)
Segregation Analysis 100:46:32
Confirmed for Hit At5g62230
Parent of DUPLO pair none
Parent of pair(s) 3108, 3209

Gene hit At5g62230

 
Sequence (A. th genome BLAST matches underlined) 
>31-K012312-022-109-G04-8409
TTGATCCATGTAGATTTCCCGGACTGAANGCACTTACCTTCTTGAATTTGGCTCGTCTGA
CTTTGAGAATCCTATTCAATTCACAGGGATTTGAGTGACAATGAGCTTGTTGGTCCTATC
CCACCGATGCTTGGCAATCTCTCATTTACCGGAAAGCTGTGAGTCTTTTTTGTATAACTG
TAGTATCTCATATGTTCAGCTAATCAGATCTTGGCATATGCATTGATACCTTTTTTTTTG
GTGGAAAGAGGGATCTCCATGGCAATATGCTAACTGGCCCAATCCCCTTTGAGCTGGGAA
ATATGCCACGTTTAACCTTTTGGAAACCTTGTTTAAAACTTCAAATTTGTTAACTTAGCT
TTCGCATTCCATATACTAATCTATTTGGCTTTTCTTTAACCGATTTTGAAGGCACCTAAC
CAACAATAAACTATGGGATCCTCCCTATAGGGAGCGTATTN
GenBank Accession AL756481 [GenBank]
Graphic View Graphic view of gene At5g62230
Predicted Position of Insertion Chr5:24998770 - go to primer design
BLAST e Value 2e-135
Hit Clone Code (BAC ID) MMI9
Hit Gene Code At5g62230 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ERECTA-like 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37