SimpleSearch - Line and FST details
Line specific information
| Line ID | 110C11 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N410499) |
| Segregation Analysis | 100:96:77 |
| Confirmed for Hit | At1g20620 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At1g20620
| Sequence (A. th genome BLAST matches underlined) | >83-K012311-022-110-C11-8409 TTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATTTCCTATGAGAAA AGAGCGTCTATTATAAATAATCGGATATTTAAAAGGGCGTGAAAAGGTTTATCCGTTCGT CATTCGTATGGGCATGCCAACCACAGGGTTCCTCGCTCGGGAGTGCTTGGCATTCCGTGC GATGATGATCTTCTGTTCAACCACCCAAACGTGGGAAAGCCTGACTACTAGACCAGCATT CCAAAAAGATCCCTTGGCTCGTCTGGGTCGGCTATGGGATCCTCCCTATAATGAGTCGTT TCACTCAATTTCAAGAGTCTATCAATAAGAATCGGAACTTGTTGGATTTATGAAAGAGAT AAAACTGAGATATAGAGTCTAAGCTGAGATCTTGTTCGTGAAGCGTGATGTGATTATTTT TAACATGTGTTACTTCGTAATGGGCAGGTCCGGTTCTTCTTGAGGATTATCATTTGATCG AAAANGTTGCTAATTTCACCAAAGAGAGGATCCCTGAGAGAAGGGGTCATGCTTTGGGAT CCTCCCTATTAGGAGTCGGATTACTCAA |
| GenBank Accession | AL756533 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:7144318 - go to primer design |
| BLAST e Value | 1e-111 |
| Hit Clone Code (BAC ID) | F5M15 |
| Hit Gene Code | At1g20620 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | catalase 3 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | CR934546 [GenBank] |
Gene hit At4g16110
| Sequence (A. th genome BLAST matches underlined) | >83-K012332-022-110-C11-35St CTGCGTAAGGGATGACGCACAATCCCCTATCCTTCGAAGACCCTTCCTCTATATAAGGAA GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGTCTTTT TCTCTTACTCTTTTTGCAGGATGTCTTCATCGCTAATGGCTCTATGTCCGGGAAATCTAC ATGGATCAGCAATGATGATGATGGTCAGTATGGAGAAAAATAAAGAGTCTGTACCATGTG TTTTTCACTTCAAAAATGTAGATGGACGCAGCGTTATTATAGAAACGAAAGTGCATTTTG ATAATACGACCAATTACTAGCCGTCGTATATATACGCGAAAGCCATAAACAAATTATTCT AATTCGGAAATCTCTATATCCACGTGTCTACATTCACGTCGCAAGGGGGGCTTAGATGAG AAACTTGACGATCGATGCCTTGATTTGGCCATTCCCACATACCCATTTCATCTTGAGATT GGTCTGATATTATGCGAAAATATACACTCATATACATAAATACTGACAGTTTGAGCTACC AATTCAATGGAGCCCATTACCTTACATAATTTACTCAAATGCTATGGGATCCTCCCTATA GTGAGCGTNATAACCCTCACGACTTTGGGAATCCTCCCTATAGGGAGTCGTTTTAC |
| GenBank Accession | FR803238 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:9115425 - go to primer design |
| BLAST e Value | 0.088 |
| Hit Clone Code (BAC ID) | FCAALL |
| Hit Gene Code | At4g16110 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | response regulator 2 |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | FR803239 [GenBank] |
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Last Updated on 10.06.2021 13:37 |
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