SimpleSearch - Line and FST details
Line specific information
| Line ID | 110D02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N410502) |
| Segregation Analysis | 100:80:38 |
| Confirmed for Hit | At5g26030 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 837 |
| Note |
Gene hit At2g16510
| Sequence (A. th genome BLAST matches underlined) | >12-K012311-022-110-D02-8409 TGATCCATGTAGATTTCCCGGACTGAAGCGGTTTATCGGTTCCGTTCACTGAGGAGGCTG TTCTGCAGGTGTGATTTGCTCTCCTGTTCGATGGAGCTCTGCTTATGTTTGTGTCATAGT CATGTTTATCTTAACAAGCTAATCTCTTTTAATCTGATAAAGAAGGACAAATTACTACTG GGATCCTCCCTATGACGAGTCGATTTACTCAGCTTCCTTGGCGCCGCCGCCGCTCTCGTG TTCTCCTGTACGCCATGACCTTCTCCTCTCACTCGATTCTCTTCCAATTCGTATCATTCC CTTTGATCTGATCCAGATGATTGCTTCTATGGGATCCTCCCTATAGTGAGTCGTTTTACT C |
| GenBank Accession | AL756536 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:7160924 - go to primer design |
| BLAST e Value | 5e-53 |
| Hit Clone Code (BAC ID) | F1P15 |
| Hit Gene Code | At2g16510 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | ATPase, F0/V0 complex, subunit C protein |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | failed, line belongs to a contamination group, please check line 110C02 |
Gene hit At5g26030
| Sequence (A. th genome BLAST matches underlined) | >12-K030265-022-110-D02-8409 AGCGGTATGGTATCCGTTCACTGAGGAGGCTGTTCAGCAGGTGTGATTTGCTCTCAGTAT TGATGGAGTTTCTTATGTTTGTGTCATAGTCATGTTTATCTTAACAAGCTAATTTCTTTT AATCAGATAAAGAAGGACAAAATTACTAGACTTGTTGTATGGGATCCTCCCTATAGTGAG TCGTATTACTCACTTCCTTTTAATAATACGGCTGCGGACATGTATGTTATCCTCCCTATT TTGAATTTGATTTTCCCTTTTCTTTTTGTAATTCTTTTGAAACTGTTTCTTTTTTTTTCC AATTTTNTGTGGAAGGGTTCNNATTTTTTTCTATGAGCAGGTGGGAGAGAGAATGGGGGT AG |
| GenBank Accession | CR934549 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:9097402 - go to primer design |
| BLAST e Value | 9e-81 |
| Hit Clone Code (BAC ID) | T1N24 |
| Hit Gene Code | At5g26030 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | ferrochelatase 1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |