SimpleSearch - Line and FST details


Line specific information

 
Line ID 111B05
Vector Used pAC161
Line Availability available as T3 set from NASC (N410577)
Segregation Analysis 50:3:3
Confirmed for Hit At3g27980
Parent of DUPLO pair none
Parent of pair(s) 3748, 3797, 3816, 3837, 3851, 9858

Gene hit At3g27980

 
Sequence (A. th genome BLAST matches underlined) 
>34-K012310-022-111-B05-8409
NTGATCCATGTAGAATTTCCCGGACATGAANGCATTTACAATTGAATATATCCTGTTAAG
AAGAACGTACAACACCGCAACTGTTGGTAAGAATTTGTATTCTCTTCTTGAATAGTTTAT
AGTTTTCTCTTCTTTATACCAAACTATAACATTCTTAAAGACATTACTAATTATTCTAAA
AATATGTTTGAAGCTTCTAATGGTAATGGATTCATCGGAGTAGACATGTGCTTTCGAAAC
ACGGCCGGACCGGCAAAAGGACCAGCTGTTGCCCTCCGTGTGAGTGGTGATATGTCCGTC
ATTTATAGATGTCGTGTCGAGGGATATCAGGATGCCTTGTATCCTCATAGTGACCGCCAG
TTTTATAGGGAGTGCTTTATTACCGGCACTGTAGATTTTATATGTGGAAACGCGGTGGCG
GTCTTTCAATTCTGCCAGATTGTAGCAAGACAGCCTAAGATGGGGCAGAGCAATGTCATA
ACCGCTCAATCACGCGCGACTAANGACGTCAAATCGGGCTTCTCAATTCAAAACTGCAAC
ATCACAACAAGTTCGGATCTATGGGATCCTCCCTATAGTGAGTCGT
GenBank Accession AL756610 [GenBank]
Graphic View Graphic view of gene At3g27980
Predicted Position of Insertion Chr3:10395041 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) K24A2
Hit Gene Code At3g27980 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Plant invertase/pectin methylesterase inhibitor superfamily
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL756610 [GenBank]


Last Updated on 10.06.2021 13:37