SimpleSearch - Line and FST details


Line specific information

 
Line ID 111D02
Vector Used pAC161
Line Availability available as T3 set from NASC (N410598)
Segregation Analysis 50:9:4
Confirmed for Hit At5g41310
Parent of DUPLO pair 8011
Parent of pair(s) none

Gene hit At5g41310

 
Sequence (A. th genome BLAST matches underlined) 
>12-K012310-022-111-D02-8409
GCTGATCCTGTAGATTTCCCGTACATGAAGCCTTTACAATTGAATATATCCTGCACCTAT
CATGCTTAGACGAGAGGCTAAATCACTGTGCCCAGTCCCTTTATCTCCATACATAATGAA
CTACACAATAACAGGTTATCTCCCTTCAAGGAGACATCCACAAAGCGCGAATACGAAAGG
GATCACCATACTTTTTTCACCTCCTTTCCGTCGATAACTTGTTGTTGAGGTGCCTTAGTA
GCCTGCCTAGCCTGTGTCGGGTGCCTCATCTACCTGTTATGGGGGCATATCTTTCTTCTC
CAATCTTTTAGGTTTAATCACACATAACTTCTCGAGCTATTTAGTTTCTACTACGCGACA
CCTCTGAATGCTTTACTTGCCTCTCCAACTCAACTTTAGCTTTTTGAGCATTGAGTTTTA
GCTCCAAAAGCTGTTTTTCATGTGCCTATATCACAATTTCAAGGTCTTGCTTCAACTTAG
AAAGCTCAGCATTACTACGCTCTTTTCCTTTTCTATTTGGAGCACATCTTTTTTCTTCTG
ACCTAATAAGCCTATGGGATCCCTCCCTATAGGGGAGTCGTATTACTC
GenBank Accession AL756629 [GenBank]
Graphic View Graphic view of gene At5g41310
Predicted Position of Insertion Chr5:16520235 - go to primer design
BLAST e Value 2e-86
Hit Clone Code (BAC ID) K1O13
Hit Gene Code At5g41310 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL756630 [GenBank]


Last Updated on 10.06.2021 13:37