SimpleSearch - Line and FST details


Line specific information

 
Line ID 112G11
Vector Used pAC161
Line Availability available as T3 set from NASC (N410739)
Segregation Analysis 50:43:43
Confirmed for Hit At5g54530
Parent of DUPLO pair none
Parent of pair(s) 2739

Gene hit At5g54530

 
Sequence (A. th genome BLAST matches underlined) 
>87-K014767-022-112-G11-8409
TGATCCATGTAGATTTCCCGGACATGAAGCACTGTACATTTCCTTTATGCCAGCATTAAT
AGGAAGCAAGGCTATTTATCCATTTCTGAGAAGGCGAAAAGGCGTCACCAGACAAGGCGT
ACGCGCATTCCAGTTCTTGCATGTAAAGCGTTGGATGGTACACTATTGACTATGCGTGCC
GACATAGATGCGAGACTATCATCTTAATTTCCGGCTTTCTCATTTTACCTTTGCCATGGG
TTAAACTAATTAGTCGGCTTTTAAATCAATTTAGTTATGTGAAATATACATTTTTGTGTT
AACAAATACTGTTTTTTATCCCAACAAAGTTCAAATATTTAAGTTTTTCATTACGAAGT
GenBank Accession FR803298 [GenBank]
Graphic View Graphic view of gene At5g54530
Predicted Position of Insertion Chr5:22153214 - go to primer design
BLAST e Value 2e-73
Hit Clone Code (BAC ID) MRB17
Hit Gene Code At5g54530 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation serine protease, putative (Protein of unknown function, DUF538)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR803298 [GenBank]


Last Updated on 10.06.2021 13:37