SimpleSearch - Line and FST details


Line specific information

 
Line ID 113E07
Vector Used pAC161
Line Availability available as T3 set from NASC (N410807)
Segregation Analysis 50:49:39
Confirmed for Hit At3g55260
Parent of DUPLO pair 488
Parent of pair(s) none

Gene hit At3g55260

 
Sequence (A. th genome BLAST matches underlined) 
>53-K012505-022-113-E07-8409
NTGATCCATGGTAGATTTCCCGGACATGGAACAAGTAGTAAGTAATAGCCAGCACATGAT
TACATTCTCTTTCCATGTGATGGACAAGAAAGCAAATGAGAGAAAGAGATACGGACTTAT
TACCTATCAGCAGACCGCGGTATCCAAATCTATGGGATCCTCCCTATAGTGAGTCGATNT
ACTCANGACTCCTTTCTTAGATGGATATGATACTCTAATTCCTTCGCTTCTGAGACGAGG
GGGGGCGATTGGTTTTTCAATGTGCTGCTTTGGGGTGGGGGACACTATTTGGGATCCCTG
TTGAAACTGCATATATCACTATGGGCGGTACTGTTCTGATTGAAGGTGGGAGCGGGATCC
ACCTGACGATGCCTCTGTGATTGCAATGAAGTGACTGGTAGCCTTGCAATGGAATACGTG
GAAGAAGTCGGATATTAATCTCAGCCCTACATGATCATTTGATCATCAGGTATTCTGTGA
CTGTACTAATAGGTGTTCTTGGAGCATATGTGCGTGTCGCGGCTCCGCCATGGATTCGCA
CTGTGAAGGCTTGCCATAGAGACAGGTACATACTCTGTTAAGAACTGTGGCCTAGCACGA
TTCGGAGTGTCAAGGAATTGTCGCTCGGTGCAAGCCTGTAGACGCCTTGGCAATATGGGG
ATGTCTAAGAGGCAGCCTCTCATGGATGAGAATTGGACTACAGGGATTAATGGCCATGGC
CTGGAAGTAAAGTCCCTGGGCCTGGCGGAATCGTGGTAAGATTAAGGAAGAATTTGGAAA
TTGTTCC
GenBank Accession AL756816 [GenBank]
Graphic View Graphic view of gene At3g55260
Predicted Position of Insertion Chr3:20490322 - go to primer design
BLAST e Value 1e-65
Hit Clone Code (BAC ID) T26I12
Hit Gene Code At3g55260 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation beta-hexosaminidase 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37