SimpleSearch - Line and FST details


Line specific information

 
Line ID 113H08
Vector Used pAC161
Line Availability available as T3 set from NASC (N410844)
Segregation Analysis 100:90:67
Confirmed for Hit At4g25010
Parent of DUPLO pair none
Parent of pair(s) 4799, 4822, 4918, 4923, 8526

Gene hit At4g25010

 
Sequence (A. th genome BLAST matches underlined) 
>64-K012505-022-113-H08-8409
NTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATGGAATATATCCTGGCAGG
ATATTTTGGCGGGTAAACCTAAGAGAAAAGAGCGATCTGAAAATCTTCGGATATCTAAAA
GGGCGCGAAAGGGTTTATCCGACCGCGCATTGGCATGTGCATGCCACCACATGGGTCCCC
TCGGAAGTGCTTGGAATTCCGTGCGATAATGACTTCTGTTCAACCACCCAAACGTCGGAA
TGCCTGACTACGGAACATAACTCCGAAAAGATCCCTTGTCTCGACTGGGGCGGGTATCGG
ATCCTCCCTATGCGAGTCTGGNAACTCACTGTAAGCATCATCGATCTCAAACGTACACTT
CTATTTTTATTTGCTTTCTCTTAACAAAGAAAAATGTTTTGGACATTATTTTCAGGCCAA
CTTTTGTAAGAATCTGCAAGAAAAAATCGATAGAAGGTTTTGAATCACTTCCCTACGTGT
CAGCCCTCTTTAGCGCGATGCTATGGATTTACTATGCTCTGCAAAAAGATGGAGCAGGCT
TCCTTCTCATTACCATAAACGCTGTGGGATGCTTCATCGAAACCATCTACATCATCCTCT
TCATCACCTATGCTAACAAGAAAGCTATGGGATCCTCCCTATAGGA
GenBank Accession CT026112 [GenBank]
Graphic View Graphic view of gene At4g25010
Predicted Position of Insertion Chr4:12856149 - go to primer design
BLAST e Value 1e-167
Hit Clone Code (BAC ID) F13M23
Hit Gene Code At4g25010 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Nodulin MtN3 family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit T7H20

 
Sequence (A. th genome BLAST matches underlined) 
>93-K020161-022-113-H08t-8409
AAGCCATTTACAATTGAATATATCCTGGTTGTGATTCAATCGAATAAAAATCAATATACC
AAGTAATTACTTTTTACTAAAAAAATAACTATAATCGGCACATGTTTTGAAAATTAAGGT
CCATTGGACCAACTTCCTAATTGAATAATAAAGAAAAAACAATTACATTAGCATGATGTA
TTAATTATCCGTAACATAATATGATTTATGTTCAGCTACGTACAATAAATGAATCTTGTC
ATTCAACGATTTTATTTGGAACATTTGTTTTATTTATTTGGTTCAACCCTTAAAACTTTT
TTGTAGTGTATATACATAAGGCACCTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX530781 [GenBank]
Graphic View Graphic view of sequence BX530781 of line 113H08
Predicted Position of Insertion Chr5:391737 - go to primer design
BLAST e Value 6e-149
Hit Clone Code (BAC ID) T7H20
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37