SimpleSearch - Line and FST details
Line specific information
| Line ID | 114E03 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N410899) |
| Segregation Analysis | 100:100:77 |
| Confirmed for Hit | At5g10600 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 93773, 93774, 93775 |
| Note |
Gene hit At5g10600
| Sequence (A. th genome BLAST matches underlined) | >39-K028350-022-114-E03C-8409 TATCCGAATCCGGCGTTGAACATTAACACTACAATTCCTTTGCATACATCATCAGAGTAA AATTCAGGTTCTGATTCTTGAAGCTTCAAGAATTTCTCCACTACTGAACCAGTGGAATCA AACTTCTTCATTCGAATATCATCAATGAGTCGCTGAAGATACTCATCTCTCATCCTCTGT ATCTCAATCACTCTGTTCTCAAGACCTTTGTACCCAATCCATCTCAACACTGGGAAATAG TCACAGACATTCATCGACGATAGGCTCGAGAAAAACCTTGATTTGAATTCATCTAAGAAC TTCGTCTCTGATTCTGAATCACTCTCATTGACCCCGCGATTTCCAGATACTAATCTAAGC ATGACGTGAGCGGTGAGAAGAGTGAATTGATACCTGAGATCCACTTTACAAGAATTACCA CCGGAGAATCTGAAGAGACTCGAACAGAGATTGGAGACTTCTTCAGTTCGTATGGAAGAG TTCTTCTGTAAGCTGACGGAGGAGAAGACTTCGAGAGTGGAGAGACGACGGAGAGTCCGC CAGAGATCGCCATAAGGAGCAAATCCAAAGTTTTTGTAGCCGTAGCTGAAGTGATCGGAG GTAATGGTCTTGGGACGATTCGCAAGGGCTATGTCGTGATTGGTGAAGCATTCTTCGATG GAATCTGGAGAAGAGAGGATCAAAACTTCACGGCATCCGAATTTGAGGAACAGAACCGGG CCGTAGTTTGAAGAGAGATGATGTAGAGCTTGTGGTAAAGGATACTTATTGATGAGATGA AGATGACCGATGATCGGAAGTGGAGTAGGACTTGGAGGTAGTTTAGGGTTTTGACTCCAT AGGAACTTGGTGATGAAGAAGGTCAAAGTAACTGTGAGCAAGAAGATGACCCAGAGATTT TCCATTT |
| GenBank Accession | HG968743 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:3352181 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F12B17 |
| Hit Gene Code | At5g10600 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | cytochrome P450, family 81, subfamily K, polypeptide 2 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | HG968743 [GenBank] |
Gene hit At4g26300
| Sequence (A. th genome BLAST matches underlined) | >21-K012504-022-114-E03-8409 NTGATCCATGTAGTATTTCCCGGACATGAAGCACTTTTCTCTCTGATCTATGTGTCTGAC CACTCCACTCTACAATCTGTTTGCTTTCATCATTGAACATAGTTATAGTTATGATGCTTG ACAGCTTAAGACTTTCCTCTCTACTGTGACCAGAGAAAACAAACTTCTATCATCTGAACT GGATCAGAGAATCGATGACATATCTGGAACGATCCTTAGGAACGGAAAACTACAATCACC GACACATGAACGAGCTGGAATCGTACCTTTTTTAGCTCATCTATGGAAAAGCCTGACACT CTGATGACCGAACAGATCCAAGAATGGGCGTGCGGAATGTACACGGGTGAAATTGCCTGC TCATGACATATGAGCAATAAGGTTGTGTAGGCGACTGCACAAAGCATATTTGTAGACTCT GGGATCCTACCCCTAGAAAGACAGACTTCTCATTTGAACTAGGGACCTTGGGCTGCCTCC CTGTGGGGGCGCCCATTCCCATGCTGGGGGGACCTTACACATGAGCTTCTACAGGGCCAA CGGTCACCAGAGGAGACCAGGCGGCTCCTACTTTGGGGAACACGGGCCTAGCCATGCGGA GATGCTTGCACCCTCGTGAAATCACTCGGGTTGCCAAGATT |
| GenBank Accession | FR803324 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr4:13309063 - go to primer design |
| BLAST e Value | 4e-16 |
| Hit Clone Code (BAC ID) | T25K17 |
| Hit Gene Code | At4g26300 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Arginyl-tRNA synthetase, class Ic |
| Insertion Classification | CDSi |
| Confirmation Status | failed, line belongs to a contamination group, please check line 114D03 |
|
Last Updated on 10.06.2021 13:37 |
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