SimpleSearch - Line and FST details
Line specific information
| Line ID | 116C06 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N411070) |
| Segregation Analysis | 100:100:76 |
| Confirmed for Hit | At2g26510 At2g26510 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 4984, 5006, 5007, 10207, 73594, 73600, 73603, 73607 |
Gene hit At2g26510
| Sequence (A. th genome BLAST matches underlined) | >43-K012564-022-116-C06-35St TGGCGTAAGGGATGACGCACAATCCACTATCCTTCGCAGACCCTTCCTCTATATAAGGAA GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG GTTTAAACTACAAAGACATGATAAACGCGCAAGTATAAAACGAGCTTTAACCTGTTTCTC GGAATCGAATTGACCATTGTTGTAATCTCTGATTATAGACAATACGGGAAGAACATACGC GAACGATACTCCCATAACCGTGGGAAGCCTTGTCCCGATAAGCGTTTGTAGCAACGTGTT TATGCCCGACATAAACAATATAGTCTGGATAACCCGCGCTTTATCACCCTATTATCGTTC AAAATACCAAACGGTCGATTTCAGAATCATATAATAACATAAATATTAGACAACCGGATC CAAAAACCAAAAACATCACATACAGGATCTCCACCCATTGGTGACACTATGGGATCCTCC CT |
| GenBank Accession | BX511282 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:11275236 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | T9J22 |
| Hit Gene Code | At2g26510 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Xanthine/uracil permease family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At2g26510
| Sequence (A. th genome BLAST matches underlined) | >43-K012502-022-116-C06-8409 TGATCCATGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATATGGACATATT GCTGATTAATATTTCTACTTATAGTGTTTCTTTTTCTTAAATGTGATGTCGCGGTGAATT GTGGTGCAGTTCAACGATATACTTAATACGATATTTGCTTCGGCTCCGTTGGTGGCGACC ATTCTTGCGACCATACTATGGGATCCTCCCTATAGTGAGTCGTTATACTCAAACNCNNGA GGAATCCCGTGGTGGAAGCCCTTCCAGCACAGGAACGGAGACGGCAGGAACGATGAGTTC TATAGTATGCCCCTTAGAATCAACGAGTTAATGCCGACACGGTTCCTTTGAAGACTGCCC CTGAACGTTTCTTCTGTATTTGGAAATGTAAGATATGATTATGTGCATACCTTGTAGCTT CATTGGGGAAAAATTGAGTCCAGTGGATACAAATGAACATAGGCCTTTGATGGAAAAAGC TATTTTTTTGCAAACTATATAACTTGTGTTACTATGGGATCCTCCCTATAGTGAGTCGTT TTCCTC |
| GenBank Accession | BX511281 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr2:11277172 - go to primer design |
| BLAST e Value | 5e-142 |
| Hit Clone Code (BAC ID) | T9J22 |
| Hit Gene Code | At2g26510 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Xanthine/uracil permease family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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