SimpleSearch - Line and FST details


Line specific information

 
Line ID 119D02
Vector Used pAC161
Line Availability available as T3 set from NASC (N411366)
Segregation Analysis 50:48:36
Confirmed for Hit At5g64710
Parent of DUPLO pair 2539
Parent of pair(s) none

Gene hit At5g64710

 
Sequence (A. th genome BLAST matches underlined) 
>12-K012517-022-119-D02-8409
TTGATCCATGTAGATTNTCCCGGACATGTAAGCCTTTACAATTGAATATATCCTGTCCAT
GTGAATCAGGGCACATTGTTACTTCGTCAACCCCGGTTCCCTGTGAATCTGATTCATCAT
TCGAAGATCTCGGTCCAGTTTCCAAAAAGATTCATGAGAATGAGTCATCTGTTTCAGAGG
GAGAAGATTATGACTCATAGATGGAGGAAAAAGCTTCTTCAAAACAGAGCGGTGGGGAAA
GGAATAAGAAAGAAGATGAAACAGAGAGTGATTTACTTCAAATTCTGGGTTCTTGGGACA
CTGATAAGAAGCCTGCAAAAACTTTTGGTGAAGATAAGCTTGTTGAGGGAATATTGATGA
GCTTGAGGAAGAAACCATCAGGTGACTCTATGGGATCCTCCCTATAGTGAGCGTTTTACC
TCAGGCATTTGCGCTACGTCGAGCGGCCTGAGTGGCGAAGGGCCTTTTTGCTTATGATTC
TTAGACATTGTTGCTCTGGACACGCGGGCAGCGCACCACCAAGTGAACGATAATTCTATG
ATAGCTAATGCATAACCATAGGCTAGGGATAGACAAGAACTGCACCCTTGACTCTGAGTG
AGAAACAGCGACGAAGCCTAGTGGGAAAATAATGAAAGATTCGGCATCGTTACTAGGAGA
ATCTCTAACAAGAACGTCATTAACCTGGAGGGCCGGGTNGCTGCTGCATTGCTAAGCTCT
GGAATTTTTCCCCAGAAAAACTGAATCTCTTCA
GenBank Accession AL757201 [GenBank]
Graphic View Graphic view of gene At5g64710
Predicted Position of Insertion Chr5:25871747 - go to primer design
BLAST e Value 5e-179
Hit Clone Code (BAC ID) MUB3
Hit Gene Code At5g64710 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Putative endonuclease or glycosyl hydrolase
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37