SimpleSearch - Line and FST details


Line specific information

 
Line ID 119F12
Vector Used pAC161
Line Availability available as T3 set from NASC (N411400)
Segregation Analysis 50:50:49
Confirmed for Hit At3g14070
Parent of DUPLO pair 8014
Parent of pair(s) none

Gene hit F15N24

 
Sequence (A. th genome BLAST matches underlined) 
>94-K012517-022-119-F12-8409
NTGATCCATTGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGTCACA
TATGCTAAATCTGGCCAATAAACTGACTAATGAAATACAATATGTCCGTTCTTATTGCAC
TCCCGTTTAGAACTTTGGACGCATCTATACAATGGAGGATACCCTGGTAGTGAGATTTTG
TTACACATATATATATTACGTGCCGAGTATATATGTAGCAAAATCCTTATCGCATTTTAA
TACCGATACTATCGCTGGCAATGAATAATTTTCTATGTGGACTTTACGAATGCGACACTA
CTGAAGACACGTGTCACAACCTTGTTCTTTGATCTATGGGATCCTTGCTATAGCGACCCA
GATTACGTGAGACGGGACACCTGAGGGTACCTAGGATAGACACCTCTCACGACGCGCGCT
AATGAGACGCTAGGGCATCGTTTGTCTTGGACCGAGTATATCATTCGACCAAGGGAATTG
TTAGACTCCTTCGGACGTGCGCATGGAATAGCGACTATGAATGGATACTATACCCTGACG
AGCGGTGCTACTATTGAAACGACTCTTTTGCATTCACACCGGGGGCGTGTCTTGATCAGG
TACCGTAACTTTGGCGAATAGGCTAGAATCAGAGGCCACATTTGACGCCCTCTGACACTG
AGGAAGACTCTGAGGCCGACGTGGACCATGCCCAATCTCAGTCCCTATCAAGGGGG
GenBank Accession FR803412 [GenBank]
Graphic View Graphic view of sequence FR803412 of line 119F12
Predicted Position of Insertion Chr2:6017924 - go to primer design
BLAST e Value 1e-19
Hit Clone Code (BAC ID) F15N24
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At3g14070

 
Sequence (A. th genome BLAST matches underlined) 
>94-K012517-022-119-F12-8409
NTGATCCATTGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGTCACA
TATGCTAAATCTGGCCAATAAACTGACTAATGAAATACAATATGTCCGTTCTTATTGCAC
TCCCGTTTAGAACTTTGGACGCATCTATACAATGGAGGATACCCTGGTAGTGAGATTTTG
TTACACATATATATATTACGTGCCGAGTATATATGTAGCAAAATCCTTATCGCATTTTAA
TACCGATACTATCGCTGGCAATGAATAATTTTCTATGTGGACTTTACGAATGCGACACTA
CTGAAGACACGTGTCACAACCTTGTTCTTTGATCTATGGGATCCTTGCTATAGCGACCCA
GATTACGTGAGACGGGACACCTGAGGGTACCTAGGATAGACACCTCTCACGACGCGCGCT
AATGAGACGCTAGGGCATCGTTTGTCTTGGACCGAGTATATCATTCGACCAAGGGAATTG
TTAGACTCCTTCGGACGTGCGCATGGAATAGCGACTATGAATGGATACTATACCCTGACG
AGCGGTGCTACTATTGAAACGACTCTTTTGCATTCACACCGGGGGCGTGTCTTGATCAGG
TACCGTAACTTTGGCGAATAGGCTAGAATCAGAGGCCACATTTGACGCCCTCTGACACTG
AGGAAGACTCTGAGGCCGACGTGGACCATGCCCAATCTCAGTCCCTATCAAGGGGG
GenBank Accession FR803412 [GenBank]
Graphic View Graphic view of gene At3g14070
Predicted Position of Insertion Chr3:4661441 - go to primer design
BLAST e Value 1e-10
Hit Clone Code (BAC ID) MAG2
Hit Gene Code At3g14070 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cation exchanger 9
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37