SimpleSearch - Line and FST details


Line specific information

 
Line ID 122E08
Vector Used pAC161
Line Availability available as T3 set from NASC (N411672)
Segregation Analysis 50:32:24
Confirmed for Hit At3g49370
Parent of DUPLO pair none
Parent of pair(s) 67837, 96803, 96804, 96805, 96806, 96807, 96808

Gene hit At3g49370

 
Sequence (A. th genome BLAST matches underlined) 
>61-K028302-022-122-E08-8409
TTTCTATATCGTCACGGATCAGACCATCCCGAGGATGTGGTGCCGTATGGAATCCTCCCT
ATAGTGAGTCGTATTACTCNTTTTTTTTTTNTGTTTGGTCTTAGGATATGGAGGATGACT
TCAAGAGCGGGAAGGGGATTACAAAAAGAGATAGATCGAGTATTAGCGAAGAGAGGTAAT
GTGTAAGAGAGTGGGAGAGTGTTAGGTAAATTAAGATTTGAGAATAAGAGGGTGAGTAGA
GATTGTTTGTTGTAAATAAGGGGTGGAAATGTGGTATTGAGATAAGATAATAGTGATTAG
TAGTATTATGATAGAGGGGAGATAAAAGGGAGTTGTGAAATATTGAGTAGTATGGGTAAG
AGTGAATGAGGAGGGGTGGAGGTAAGAGGATTAAAAAGAAGATGAAGTAGGGAGAGTGTA
GAGAAGGTTCTCTCTATTGGAATGTTTCATATGCTTTTGAATTATGTG
GenBank Accession CR770170 [GenBank]
Graphic View Graphic view of gene At3g49370
Predicted Position of Insertion Chr3:18307515 - go to primer design
BLAST e Value 6e-05
Hit Clone Code (BAC ID) F2K15
Hit Gene Code At3g49370 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Calcium-dependent protein kinase (CDPK) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR934633 [GenBank] FR803479 [GenBank] CR770170 [GenBank]


Last Updated on 10.06.2021 13:37