SimpleSearch - Line and FST details


Line specific information

 
Line ID 122G02
Vector Used pAC161
Line Availability available as T3 set from NASC (N411690)
Segregation Analysis 50:42:35
Confirmed for Hit At4g26280
Parent of DUPLO pair none
Parent of pair(s) 4848, 4867, 7425, 7430, 90460, 90461, 90462, 90463, 90465

Gene hit At4g26250

 
Sequence (A. th genome BLAST matches underlined) 
>15-K012551-022-122-G02-8409
GTCCTTTACAGCTACTTGCAGCGTGCTGGAAAGGCGTGTGAGTAGAGAACAACCTTGGAG
ATGATGATGAGAGCTATGGGATCCTCCCTATAGTGAGTCGTATTACTCATTCAGTTTCAT
CGAATCTCCAAGGCTTCGAACCCTACAAAATTTGAGTAACAGAAATACATTAAATCTACA
TTAATGCATATATGTAGAGACGAAATATTGAATTTAAACGTACATTTGCACAATAATGAA
TAACACTGATTTGGTCAAGGTCAATGTGTTCAGGATGACGCCAAAGCATAGCCATTACAA
GGTTGTAGGTCGAAGGGATGGGCTTGTAAATGTCTGTAAAGTATTCATTCAGAAAATCCT
ACAAAAAACAAGCATTAATATTAGATTTGTATAATAAAGAAACTAAAATAAAATAATGAT
AAAGAAAACAAAACAAACCTGTTCGGCAAAATATGTCGGAGTGGTGATTTGAACAACACG
AAGGAGATCCTCGTAAGTGAGGAGATTAGGTTCAAAAACCAACATACCGGCGTTGAAATA
TACCGGCGGTGGAGAACCAAGACTTTCACAGGCCATGTCACCTTTTAAGGACATTGTTGG
CAGTAACCTATCTTAAATTGAGGAGTTTTGGACCAAAAAATCTCGCAAAACCATTCTTTG
AC
GenBank Accession AL764194 [GenBank]
Graphic View Graphic view of gene At4g26250
Predicted Position of Insertion Chr4:13290936 - go to primer design
BLAST e Value 1e-152
Hit Clone Code (BAC ID) T25K17
Hit Gene Code At4g26250 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation galactinol synthase 6
Insertion Classification CDSi
Confirmation Status unknown
Other FSTs Supporting this Hit CR770189 [GenBank] CR770188 [GenBank] CR770188 [GenBank]

Gene hit At4g26280

 
Sequence (A. th genome BLAST matches underlined) 
>15-K028727-022-122-G02-8409
CGTGGGGAAAGGCGTGTGAGTAGAGAACACACCTTGGAGATGATGATGAGAGCTAGGTCA
AGTCTCGGTGTTTGGGTATCCCGGGTACAGATTCATCTCAAGGACCCGCTATGGCATCCT
CCCTATACTGAGTCCTATTCCACACCTACATTATCTCTATACTTTTGCATAAGAGCAGAG
GCCAATTGAGACTTTTCAACGTGGGGGAGGATCCGGAAACCTCCTCGGATTCCATTGCCC
ANCTATCTGTCACTTTATTGTGAANATAGTGGAAAAGGAAGGTGGCTCCTACCNATGCCT
TCGTTGCGAGTAAGGAGAGGCCATCGTTGAAGATGCCTCTGCCCACAATGGGCCCTGAGA
TTGACCCACTCACTCGAGGAAAATGGCGAAAANTNCAAAGTGTCGGGCAAACATGGGGAC
AGATGGGATTGGGGGGGGGGGAGAAACTCCGGATGTGCCAAGGGCGCGCAGGCGAATAAG
AGCAAGAGCAAGACCAACGA
GenBank Accession FR803485 [GenBank]
Graphic View Graphic view of gene At4g26280
Predicted Position of Insertion Chr4:13305288 - go to primer design
BLAST e Value 1e-33
Hit Clone Code (BAC ID) T25K17
Hit Gene Code At4g26280 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation P-loop containing nucleoside triphosphate hydrolases superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37