SimpleSearch - Line and FST details


Line specific information

 
Line ID 123D06
Vector Used pAC161
Line Availability available as T3 set from NASC (N411754)
Segregation Analysis 99:97:76
Confirmed for Hit At5g04150
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g04150

 
Sequence (A. th genome BLAST matches underlined) 
>44-K012812-022-123-D06-8409
AGCGCCTGAGAAACAAATCAATGATGGACTCAATATATGCTTCTTCCTCTCAACGGATCG
CAGTTAATTGGCTCACTGACACAGAGATCGCTGTCCAGATTGCTACGTCAAAATGGACAT
CTGTTACAGACATGTCGCTCAGGTTATAAAAAAACAGGCTTAATGTCATAAGCGTCTCTA
CTTCCGTTTCTTCCACCGCAAGGATCTTCTACACTCTACATCTTCAGGTACTTGTCTAAA
GATATCAAAAGGTCATGATCTTCTTACATGGAACTCATTAAGATAAACTAAAATCTATTG
TTTTATTCTTATTTTTGGGCGGATGAGAGGAGATTGCAAAGTGAGACTGGAGGAACTCAT
CAATGGTATGCTCTTGGGATTACCCCAATCATATTGAGCGATATGACCTGCTTAAAAGAG
TGAATGTTGATAATTTATGTTAGACTTTTATCAAACCTGTAACCATTTTTCCTCCTTCTG
AACAATGATTATTCAACCGGGAAACTTTATTCATAAAAAGAAATTGCAATCCTTTATGAA
ATATGATTATGACCGCTGGAAACCACTTATTTTACCTGGATTTACTGAACGGTTATCACA
CCCCGGGTATTGGTTGTAAAAATCCCAAGACATTAAGAAT
GenBank Accession CR356274 [GenBank]
Graphic View Graphic view of gene At5g04150
Predicted Position of Insertion Chr5:1138995 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F21E1
Hit Gene Code At5g04150 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR356274 [GenBank]


Last Updated on 10.06.2021 13:37