SimpleSearch - Line and FST details


Line specific information

 
Line ID 123E08
Vector Used pAC161
Line Availability available as T3 set from NASC (N411768)
Segregation Analysis 50:25:17
Confirmed for Hit At1g23140
Parent of DUPLO pair none
Parent of pair(s) 4870, 7395, 89501, 89512, 89518, 89526, 89530, 89533, 89536, 89537

Gene hit At1g23140

 
Sequence (A. th genome BLAST matches underlined) 
>61-K012812-022-123-E08-8409
AATTTGATCCATGTAGACTTCCTTGACGATGAAGCATTTACACTTGAAGTCATGGGAAGT
GAACGTATCTTTATCATACACTTCCTACAGGGAAACATAACAAACAAAAACTCAGAAACA
TAATCTCTTCACCAAAACCAAAAGACTCCTTTAAGATCAAGAATCATTTCAAGAAGATCA
AGAACTAACTCACGAGAGTCACATGTTGATTAGGATCATTGATTCCAAGCGTCAATTCAT
CGTCCCACTCAGGGTTGCAGCTATTTTCCACACCACGTGTCTTCAATTTCTGAGACAAAT
CGATTGATATCATCACAAGTCTCTTAAAAGTCCATTATAAGTTCCATCAAAAACAGAGTA
ATTTCCAAATCTTCTAAAGTTTCCTCTTTTTCAAAATTGGAATCTACGGAGTATAATGGG
CTAATCTATCTTACCTCAGATGATCAAAACACGATCTTTATAACACAGAGAACAGAGAAC
ATAAGAGAGATACCTGAGAACCCATGGTTACGACGACGAAAGGGTCGCTGGTATTAGAAT
CACGACTAACAAGATTAATCCCTCTTTTCACTCTGATTCTAAGAAGTCCCACCAGATTCT
CCATGTCTCCTCGGACTCTTGTCTTTTGTCTTGTACTTGGATTCTTAGAAGAGAAACTAT
GGGATCCTCCCTATAGGAGCGTNNTNNCNNNNNCCGGNNCNNNCCCNNNNNGCNCNCCCC
TTNGGTTCCCCCNCGCCTTTTCCTGGCCACTTTTATTTTGCCTTTNCTTTTC
GenBank Accession AL764252 [GenBank]
Graphic View Graphic view of gene At1g23140
Predicted Position of Insertion Chr1:8202617 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T26J12
Hit Gene Code At1g23140 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Calcium-dependent lipid-binding (CaLB domain) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37