SimpleSearch - Line and FST details
Line specific information
| Line ID | 125A08 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N411912) |
| Segregation Analysis | 100:95:88 |
| Confirmed for Hit | At4g30020 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3970 |
Gene hit F28D10
| Sequence (A. th genome BLAST matches underlined) | >57-K104601-0022-125-A08-8409 TAGTTTTAATTCTACTTAGATACACAGTACACACATGTCTTTCTACTTAGACCTAAACCT GTACTTCTATGGGATCCTCCATATAGTGAGTCTTTTNTAGCTGGGTCNTCTTCCNNTCTT ANTGTTGCTGAAACTGCGATGCTTCTATGGGATCATCAGAAATATAAAGGGGTAATGAGG AGAGGATAAGATAGGGAGAAGATTGGGGGAAGAGAGGGAAAAATGAGATAAGGTAAGTGA GGAAGGAATAGAAGGTTGAAAGGTAAGGAAATGAGAAAATGGGAAGAGAGAAAAGGGGGA AAGTGAATTAATGAGAGAAAGGTGGTATTAAGTAAAATAGAAAAGAAGAGGAGGGGAAGG AGAGAAAAAGTTTAAAAAATGGGGAAATGAGGGTGAGAAAAAAAAGTGGAGAGGAAGAAT TGAAGGATTAAGTATAGTAAAGAATTGTAGAGGAGAAGGAAAGAAGGAAGTTGGGTAAGA TATTAGAGAGGAAAGGAAGAATTATAGAGAATTGTAGAGGGGTGAATATAATGAAAAAGA GAGGTAACGATGAGTATAAATATATGAAGGGTAGTAATGGGATTATGGATGAGAAAAGAT TAAAAGGGAGAGTAAGAGTATAAATGAGTGAAGATAAGATAGAATGAGTAATAAAAGGTA ATGAAATGAGGATAGAAAGGAAAAGAAAAAGAGGAGGGAAGAGAAATGGAGAGAAATAAT AATGTTGAGGATGGATGGGAGGAAGGTGAGAAAGTAGAGAAGGAAGTGAGATATGAGTGA AATAGAGATAGAAAATGGAAAAATAAGGAAGGAGTAAAAATAGAGATATAGATTAAAGAG GATAGAAAAGATAGAGAGAAAAAAAAGAAAATGAATAAATAAGGAGAAAAAGAAAAGAAG GAAGGGAATGTGGAAAGAGAGAAGACAGGGAGGATATAGATTAAAAAGTAAAGAGTGAGA TAAGATTAGAATAAAAGGAGGATAATAGATAGATGATAAAAAGTTGGAGAAGAGTATAAT GAAATTGATAGATGATGGAGAAGAAATGTGGAAGAGAGGAAAGTGTGAGGAAGTTGTAGA GTGAATGAAGTATTAGAAAAAGTGAGGGATTATATGAATAAAGGAATAAGAGTAAAGTAA TTAATTGAAAAATGTAAAGAATAATAGGGTAGAAAATATATGGAATGAA |
| GenBank Accession | FR803561 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:16378067 - go to primer design |
| BLAST e Value | 1e-07 |
| Hit Clone Code (BAC ID) | F28D10 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | FR803561 [GenBank] |
Gene hit At4g30020
| Sequence (A. th genome BLAST matches underlined) | >57-K012814-022-125-A08-8409 TTGATCCATGGTAGATTTCCCGGACATGAANGCCAGTAGTTTAGCTTCTACTTACTACAA CATACACACATGCTTCTACTTAAACCTAAACCTGACTTCTATGGGATCCTGGCTATAGTG AGACGTATTACGCAGGTTCAGCTTCCATCAAGAAAGTTGCTGAAACTGCCAAGCATCTAT GGGATCCTCCCTATAGTGAGTCGTATTACTACAAGGGGNGCNGACGCGGNTGGGACGTGT TCTTTTTCCAGGATGCTGGTATTGGGTGGGGGTACATCTTTGGGACCACGGTCGGCACAG GCATCTTCGGGGATGGCCTTTCCTTTATGGCAAAGATGGCATAAGAAGGAGCCGCATTAC TTTTCCTCTATCTTAAGAATAAAGCGACGTATAGGAGGGCAATGGAATCCGAGGAGGTTT CCGGATATTACCCTGGGTAGAAAAGGCTCAATGGCCCTTTGGGCTTCTGAGACTGGATCT TTGATATTACAGGAGTAGACAAGCCGGGCGTGCTCCA |
| GenBank Accession | BX649706 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr4:14680266 - go to primer design |
| BLAST e Value | 1e-16 |
| Hit Clone Code (BAC ID) | F6G3 |
| Hit Gene Code | At4g30020 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | PA-domain containing subtilase family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | BX649706 [GenBank] |
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Last Updated on 10.06.2021 13:37 |
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