SimpleSearch - Line and FST details


Line specific information

 
Line ID 125C09
Vector Used pAC161
Line Availability available as T3 set from NASC (N411937)
Segregation Analysis 50:48:39
Confirmed for Hit At1g09950
Parent of DUPLO pair none
Parent of pair(s) 567, 4422, 4502, 4678, 8487

Gene hit At1g09950

 
Sequence (A. th genome BLAST matches underlined) 
>67-K012814-022-125-C09-8409
AACTTTTGTAAATCTCTTGAGCCGAGTTAGCACCAAAGAACCTCTGCTTCAAAATGTAGC
AGATATAGAGACAAACAACGACTGACCAAAACAAGTTTCGAACCGGCGAAGCTCCTTGGC
TATGTTGTTGTCCTACGCAATCTTCATCTTCTCTATGGGATCCTCCCTATAGTGAGTCGT
ATAACTCATTACTAACTTGCTGACATGTAATTGTTGAAAAAATATTACTTTTATTGCATT
TATCAACACAAAACTGGGCTTAAAGCATTGGGCCAACAACAGTGAACAACGGGATACAAA
AAGAGTTCGTAATTCTGCAAATCGAATACAGGAGGTCCAATATTTCAAAAGATGCATATT
TTCCTTGGCTAAATTGGACAATGTTATTGTTAGGCATGGCGTTGACTTTATAGGCTTCCT
ATGGGATCCTCCCTATAACGAGCCGTATTACTGAGCATACCGGGGGATCCGCCACGCTTT
GTTGCACGAGGGCGAAATCTCGCATAACTTCTCTCTCTTTCCTCCTATGGGATCCTCCCT
ATAGGGAGTCGTATTACT
GenBank Accession AL764396 [GenBank]
Graphic View Graphic view of gene At1g09950
Predicted Position of Insertion Chr1:3240658 - go to primer design
BLAST e Value 6e-117
Hit Clone Code (BAC ID) F21M12
Hit Gene Code At1g09950 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RESPONSE TO ABA AND SALT 1
Insertion Classification TS2TE (3')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g73370

 
Sequence (A. th genome BLAST matches underlined) 
>67-K104602-0022-125-C09-8409
TAGCACCAAAGAACCTCTGCTTCAAAATGTAGCAGATATAGAGACAAACAACGACTGACC
AAAACAAGTTTCGAACCGGCGAAGCTCCTTGGCTATGTTGTTGTCCATACGCAATCTTCA
TCTTCTCTATGGGATCCTCCCTATANTGAGTCNTATTACTC
GenBank Accession FR803611 [GenBank]
Graphic View Graphic view of gene At1g73370
Predicted Position of Insertion Chr1:27584553 - go to primer design
BLAST e Value 9e-67
Hit Clone Code (BAC ID) T9L24
Hit Gene Code At1g73370 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation sucrose synthase 6
Insertion Classification CDSi
Confirmation Status unknown
Other FSTs Supporting this Hit FR803610 [GenBank] FR803610 [GenBank]


Last Updated on 10.06.2021 13:37