SimpleSearch - Line and FST details


Line specific information

 
Line ID 127F06
Vector Used pAC161
Line Availability available as T3 set from NASC (N412162)
Segregation Analysis 50:50:44
Confirmed for Hit At4g05040
Parent of DUPLO pair none
Parent of pair(s) 9786, 9818

Gene hit At4g05040

 
Sequence (A. th genome BLAST matches underlined) 
>46-K012670-022-127-F6-8409
NTGATCCATGTACAATTTCCCGGACATGAANGCCTATGCGATTTAACATAGAATGTTACT
GTCTGTGACGTACATGGTTCTTTTACACATACTTACGGTTGCAAAGAACGGCCATATCTT
AACTTGTAAAGATAGTTTAAACCGATGACCACGTTACTTAACACATGCTCACCTACACTG
GCCCATAACGTTCTCCACGTTGCCGCCAATATTGGGGACCATAATCTTGTTACATCGTAG
ATGCGAACTGACGATACGCAACATTGGGGTGTTGGCCTATACTGTGGTGGTTATACACCT
TTGCACCTTGCTGTCCTAACTTGTCCCTTCCGATCAATAATAACACTATGCTATTCTCCG
GATATTGAGACCTGCGAGCTCACAAAATTTCTTTCACAAGAGTCACATCTCCAGCTTCTA
CTGCCATGTACAAGGAAGATATTCCCTCATTATTTTCAAGAAAAGAAGCATTCTGGTTCT
CGTTCACCAGAGAGGCAGCCATCTCCATATAGCGTCCTTCAATGGCCAAGTGCAGAGCAG
TATTTCCATATTTGTCTCTGAGAACATATGGATTTAGTCTCTCTCTATCTTCTTCAGCCA
GTCTATCTGAAAAAAATGTTACCGACGCAACAAGAGCCTCAACAATAGCCGAATGACCCG
CATGAGCTGCCACATGAAGCGGAAGCTGATCCTTGAAGTTAACTCCAATACAGGCATGGG
CTTTCANAAATAATGTTCTCACTAGTTCTATGGGATCCTCCCTATAGGAGTCGATTAC
GenBank Accession AL764519 [GenBank]
Graphic View Graphic view of gene At4g05040
Predicted Position of Insertion Chr4:2580964 - go to primer design
BLAST e Value 2e-175
Hit Clone Code (BAC ID) T32N4
Hit Gene Code At4g05040 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ankyrin repeat family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37