SimpleSearch - Line and FST details


Line specific information

 
Line ID 129C05
Vector Used pAC161
Line Availability available as T3 set from NASC (N412317)
Segregation Analysis 50:19:18
Confirmed for Hit At3g48860
Parent of DUPLO pair none
Parent of pair(s) 2469, 97309

Gene hit At3g48860

 
Sequence (A. th genome BLAST matches underlined) 
>19-K118836-0022-129-C05C-8409
CATTTCATTGAATATATCCTGTCCGGGACAAGAGGAGAATGAGAATGTACTGGAGAAGGT
TTGATCTCTGCGATTGAATTTTATATTATGTAATAAAGCTGTTTACTTCTGTTGTTCATA
AAATTTATTCTTGATTACAGCTTCGTCGTGCGGAAGAAAAAAGGGTGGAAGCAGAAGCTA
GGGCTAAGGAGCTCGAGAAACAGGTTTTTGAACTGGTTGTCTTGAGTAGTCCATTTTTCA
CTTATGTTGCGTCTTGAAATTCTGACTGAAAAAAATACTCCACTTGTTTAAATCTCTTTG
TATATCTTGTTGTTATCTTTTTGAAACAGCATCCCACCTCGTTGTTTAAATTTACTTTAA
ATCATATATTTCTAATGTATTGGCATCTGTTCAAGGTTTCATTTGTTTTTATTTTTGGTT
CCAAAAGGTTGCCTCTCTTGGAGAAGGAGTTTCCTTGGAGGCGAAATTGTTAAGCAGGTG
GGAGCCTGTGCCTTCTTTAGCTTCTCTTTTCTTGCTCTCTTTTTCAGAAACCAAGGTGGT
AGTTTTTAATCGCTCATGTTGAATATGTCTTTGTATAGGAAAGAAGCAGCATTGCGTCAA
AGAGAGGTTAATACCCTCAATCTATTTTGCTGCTCAGATGTAGTCTTCTTTTAATCGAGT
CATTATGTAAAACATACAATTTAAGCTGTGCAG
GenBank Accession HG968752 [GenBank]
Graphic View Graphic view of gene At3g48860
Predicted Position of Insertion Chr3:18118827 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T21J18
Hit Gene Code At3g48860 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation coiled-coil protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit HG968752 [GenBank]


Last Updated on 10.06.2021 13:37