SimpleSearch - Line and FST details
Line specific information
| Line ID | 129D02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N412326) |
| Segregation Analysis | 50:47:39 |
| Confirmed for Hit | At1g54130 |
| Parent of DUPLO pair | 2395 |
| Parent of pair(s) | none |
Gene hit At1g54130
| Sequence (A. th genome BLAST matches underlined) | >12-K012668-022-129-D02-8409 NTTTGATCCATGTAGATTTCCCGGACTGAAGCCTTTACATTGAATATTCCTGGTAACAGT CCTCCGATGATGATTTCCGCGATCGGAACTTAAATGGTGGATCTGCGCTTCGTGTAGGAT CTCACGGATGGTGCCTGGCTCAGTCCGACTCCTACGGGTGGATGCGATGATGACGATCCG GACTATGTTCTTAGTTGATGCGCCGGTACCGGGCACCGTGGAACATGGTATGCGATGGAG AGATAGGAGAACAATACGCCTTGGAATACCCCTTGTATTCTGCCGTTGACCTCACATACT GGAACAGGCTTACGCAGAACTGGTCATGCTTCATTTCTCCGCTTACATCCAGTCTCTTGC TTGAGGCCGGGATGCTATAGGAGCCTCCCTCTTGCGAATGGATTAACTGACTCCTCATGA ATTTGCTCTCCGTGTCTGCAATTTGCGGTATGCGAGTACCGGGCTTGGTCGCCTATATTG TTCATTAAAGGACCTGTTCTGTTAATGCGGTGTGTACTACTAACTATGGTGATCTTTGGC ATGGCGAGTAAAATTACTGAGTTTATCCAAACGGAACCTTATTAGCTACTGTTATTTTTA CATACATGGGAGGGCTCTTGGCTGGTGCCCCTAAATAAGGGTTATGAAATG |
| GenBank Accession | AL764662 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:20211553 - go to primer design |
| BLAST e Value | 5e-22 |
| Hit Clone Code (BAC ID) | F15I1 |
| Hit Gene Code | At1g54130 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | RELA/SPOT homolog 3 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit F23H14
| Sequence (A. th genome BLAST matches underlined) | >12-K012958-022-129-D02-35St TAATCTGACGTAAGGGATGACGCACAATCCACTATCCTTCGCAGACCCTTCCTCTATATA AGGAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGC CTTCGGTTTAAACTATCAGTGTTTGAGTCACCGTCGACAGCTTTTCCGCATCCGAGATTT CAACCCGCAACTCATTCTCCAATGCGAGCAAGGCAACAAATGCGATGACGAGAGGTGAAC AAGCGCCGATGTTTGTGCCCACGACTTCCCCACGAAAGAGAAGCCGCGGGCAAAGGTGTA AACCAAACTCAACGATTCCTTCAAATTAGGTACGAAACACAGGCCCCGGAACTCATCAAC GAGCGTAACATCGCCCGTGATTTAACTGACAACGATAGGTGGTAGGTAGTTCTGATGCGC GAGCATGGAGCCTACGAACACTATCGGATCCTCCCTCACTCGAACCAGAAAACGTCCAAT TAACCTCAAAATCATCAATCGATCCAACTAATCTACCGAAGTACTCGGCCTAAGAAGAAA GAAGACGGACGAATCTCGAGCCAAAGCCCGTACAAGCGCGAAAAACCTTCGGGA |
| GenBank Accession | AL764663 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr2:3577 - go to primer design |
| BLAST e Value | 1e-161 |
| Hit Clone Code (BAC ID) | F23H14 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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