SimpleSearch - Line and FST details


Line specific information

 
Line ID 129H03
Vector Used pAC161
Line Availability available as T3 set from NASC (N412375)
Segregation Analysis 50:34:29
Confirmed for Hit At3g09070
Parent of DUPLO pair 12757
Parent of pair(s) none

Gene hit At3g09070

 
Sequence (A. th genome BLAST matches underlined) 
>24-K012958-022-129-H03-35St
ATACTGACGTAAGGGATGACGCTCATATCCACTATCCTTCGCAAGACCCTTCCTCTATAT
AAGGAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCG
CCTTCGGTTACCCACCCTCCGCCGCCGCCACCTCCTGCTCCTCCTGTACCGCTCATTCTC
CGACTATGGGATCCTCCCTATAGTGAGTCGTATTACTCAANNNAAAGAGNNNNTACCAAT
NTTTTTNTAATTCAAAAATGTAAATGTCCGCAGCGTTATTATAAAATGAAAGCACATTTT
GATAAAACGACAAATTACGATCCGTCGTATTTATAGGCGAGAGCAATAAACAAATTATTC
TAATTCGGAAATCTTTATTACGACGTGTCTACATTCACGTCCAAATGGGGGCATAGATGA
NAAACTTCACGATCGGTGCCTTGATTTCGCCATTCCCAGATACCCATTTCATCTTCAGAT
TGGCCTGAGATTATGCGAAAATATACACTCATATACATAAATACTGACAGNTTGAGCTAC
CAATTGAGTGTAGCCTATTAACCTTACATATTCACTCAAATGCTATGGGATCCTCCCTAT
AGTGAGTCGTAATAC
GenBank Accession AL764704 [GenBank]
Graphic View Graphic view of gene At3g09070
Predicted Position of Insertion Chr3:2768930 - go to primer design
BLAST e Value 3e-23
Hit Clone Code (BAC ID) MZB10
Hit Gene Code At3g09070 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation LOW protein: UPF0503-like protein, putative (DUF740)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR803816 [GenBank]


Last Updated on 10.06.2021 13:37