SimpleSearch - Line and FST details
Line specific information
| Line ID | 131G04 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N412556) |
| Segregation Analysis | 50:44:40 |
| Confirmed for Hit | At1g20925 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 92189 |
Gene hit At1g20925
| Sequence (A. th genome BLAST matches underlined) | >31-K012721-022-131-G04-8409 CGTATGAGATTACCTTACGAGAGCCTGCCTTACGCGTGACTGGTATCTTTGGTAAACATT GTCCGAGACTTATGCTGTAACCATGATACTCTCATCCTCTATACAGATTATGACCACACC GCTGCCGAATGTATATGAATATCCATGTGCGAGGACTGAGACGCGGCTGTGGGATCCTCA CCTATAGTGAGTAGTGTTACTAGCATTACTGATCACTATGGAACCGTGCCTATTATGAGA GGAGNAACTGAGATTTAAGGTTTTGTCTTAGGAAAAAAAGTTTCTGCAGCCATTTGTTAT TGTTTATCTACCATTGAGAAGGTTTCCTCCAACAATCAGAGTCAGAACAGGAATCGCCCC GTCCCTTCAAGAAAATTAAGCTACTCAAGTAAGCATTGTTAATTATCACTGACAAGTGAG ATTTTTAATATGTTGTAGAATACCCCAGTAGAGATACTGAGTCCTCAATCACTCGAAGTG GAGCTGTGTTACCGACTATGGGATCCTCCCTATAGTGAGTCGTTTTCCTC |
| GenBank Accession | AL764844 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:7292329 - go to primer design |
| BLAST e Value | 2e-123 |
| Hit Clone Code (BAC ID) | F9H16 |
| Hit Gene Code | At1g20925 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Auxin efflux carrier family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At2g48060
| Sequence (A. th genome BLAST matches underlined) | >31-K013050-022-131-G04-35St TGACGTAAGGGATGACGCACAATCCACTATCCTTCGAAGACCCTTCCTCTATATAAGGAA GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG GTTTAAACTATCAGTGTCCCCATATACTGAACTTGCTGAGGGTGTCACCCAGAAAGCCCT CTGCATATTATTTTCGGTATCAATAATAGAACATGAGTTATGAAATAACACTAGAATTAA AAGAGCTAACTTACGTGGCGGTGTTTACTAAGACATTATGATAGCAACTGGGCCATCCAT CCGCTCGCAAGCGCTGATATTTTCAGACGCTTTAAGATTATGGAATGACCACCACCACTT GAAATTTGCATGGTTAATGAGTATGTCTGCACTCACTGCATCCGTCTGTAGCAACAACAT TACAATATTGGAAGTATAAGCCAAAACAGGAAACATTGTCTGGAAAATAACTCTTAGCTT GCGCAGACAAGATTTACCTGATCCTCGAAAGACCTGACATCACCAGAACCAGTAACACGG AAGAACTTTGGGTACAAATGATGCACTCTAAATCCATACATCGACCCATTGAGAACCATT TGGATATCAGAGCGTGTTGGAAGGTCCAGAGGGTCGACACTTGTGTCATATTTCACAGTC TCCTTGACTTTACGGCGGGCCTCTGTTAAGAACCCAAGTAACGGTGATGTCCATATCTGG GTCCCAGTAAAGGATTGAATAAATCTGGTCACAACTGGGTCAGGGACAAGCCTAAAAAAC TTGCATCAGGTTGACACATATCAGCTGGATGTCATTTTTG |
| GenBank Accession | AL764845 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:19651894 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | T9J23 |
| Hit Gene Code | At2g48060 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | piezo-type mechanosensitive ion channel component |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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