SimpleSearch - Line and FST details


Line specific information

 
Line ID 131H12
Vector Used pAC161
Line Availability available as T3 set from NASC (N412576)
Segregation Analysis 50:49:40
Confirmed for Hit At5g46050
Parent of DUPLO pair none
Parent of pair(s) 6273, 6277, 6344, 8852, 10602, 91340

Gene hit At5g46050

 
Sequence (A. th genome BLAST matches underlined) 
>96-K012721-022-131-H12-8409
TTTGATCCATTGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGTACA
TTTGTAACTGTTATTTATACATGCATTAAATAGAAGTGTAAAAGAAAACAATCGAATCTT
AAACCGACATTTACATGTACGTACGTAATGGATAAGTCTTTAGCTAATTAGTTTATTTTA
TGTTTGTTCCGATCCACAATTTTTCTCGTGTGTACAAAAACTTTCTATGGGATCCTCCCT
ATAGTGAGTCGATTTACTCACNGGGACGCCTGNNGTCTGAGGCATCCTCACTATAGGCGT
TCCTTTATCGCAATGATGGCATTTGTAGGAGCCACCTTCCTTTTCCACTATCTTCACAAT
AAAGTGACAGATAGCTGGGCAATGGAATCCGAGGAGGTTTCCGGATATTACCCTTTGTTG
AATAGTCTCAATTGCCCTTTGGTCTTCTGAGACTGTATCTTTGATATTTTTGGAGTAGAC
AAGCGTGGCGAGCTCCACCATGTTGACGAAGATTTTCTTCTTGACATTGAGTCGGAAGAG
ACTCTGTATGAACTGGTCGCCAGTCTTAACGGCGAGGTCTGTTAGGAACCACAATCCGAA
TCTTCGACCTCCATGGAAATTGGGG
GenBank Accession AL764859 [GenBank]
Graphic View Graphic view of gene At5g46050
Predicted Position of Insertion Chr5:18676928 - go to primer design
BLAST e Value 1e-90
Hit Clone Code (BAC ID) MCL19
Hit Gene Code At5g46050 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation peptide transporter 3
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37