SimpleSearch - Line and FST details


Line specific information

 
Line ID 132C07
Vector Used pAC161
Line Availability available as T3 set from NASC (N412607)
Segregation Analysis 50:8:5
Confirmed for Hit At5g42230
Parent of DUPLO pair none
Parent of pair(s) 4417, 8479, 8489, 8495, 10047

Gene hit At5g42230

 
Sequence (A. th genome BLAST matches underlined) 
>51-K012720-022-132-C07-8409
NTTTGATCCATGTAGATTTCTTTGGACATGAAGCATTTACAATAGACATAACGTCAGCTG
ATTAAAGTTCTGTTTTCTCTCATTCTTTGCATAATATTATAAGAAATAGACCTTTGTTCC
ACGACATGGAGTTAATGCGAAGACCACGCCCATATCCTGTGGGGTAAAATGGACCTATGG
GATCCTCCCTATAGTGAGTCGCTTTGCTGACGTGGTTGGAACTGTCTTCTTTTTCCAGAA
TGCTCTTTGAGGGTGGGGGTCCATCTTTGGGACCACTGTCGGCAGAGGCATCTTCAACGA
TGGCCTTTCCTTTATCGCAGTGATGGCGTTTGTATGAGCCACCTTACTTTTCCACTATCT
TCACAATATATAGACGGATAGCTGGGCCATGGATTCCGACGAGGTTTCCGGATATTACCC
TTTGTTGACAAGTATCACTTGCCCTTTGGCCTTCTGAGACTGTATCTTGAGATTTCTTGG
AGTAAACGGGCGTGGCGAGCTTCACCATGTTGACAAACATATTCTTGTTGTCATTGAGCT
TTAAGAGACTCTGTTTGAACTGTTCGCCAGTGTTTACCGTGAGCTCTGTTAGGGGCTTCT
TTTGAGACTTTGACCTCATGGAAATTGGGGATCCTCTATGGGTGACCTTCGTATGGGGAC
ATTTCCACTTGTATTCCAAGTCCTTTTGGTCGCATGGCATGATCTTTTAGGTAGTGGGGA
CTTCCATCAAGATTCAATG
GenBank Accession AL764884 [GenBank]
Graphic View Graphic view of gene At5g42230
Predicted Position of Insertion Chr5:16882244 - go to primer design
BLAST e Value 7e-58
Hit Clone Code (BAC ID) K5J14
Hit Gene Code At5g42230 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation serine carboxypeptidase-like 41
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37