SimpleSearch - Line and FST details


Line specific information

 
Line ID 132C08
Vector Used pAC161
Line Availability available as T3 set from NASC (N412608)
Segregation Analysis 50:8:4
Confirmed for Hit MCK7
Parent of DUPLO pair 163
Parent of pair(s) none

Gene hit MCK7

 
Sequence (A. th genome BLAST matches underlined) 
>59-K012720-022-132-C08-8409
NTTTGATCCATGTAGATTTCCTTGACATGAANGCCTTTACATTTGACCTAAGAGAAAAGA
GCGTTTATTGGAATAATCGGATGTTTAAAAGGGCGTGAAAAGGTTTATCCGTTCGTCCAT
TTGTATGTGCATGCCAACCACAGGGTTCCCCTCGGGAGTGCTTGGCATTCCGTGCGATAA
TGACTTCTGTTCAACCACCCAAACGTCGGAAAGCCTGACGACGGAGCACCATTCCAAAAA
GATCCCTTGGCTCGTCTGGGTCGGCTATGGGATCCTCCCTATAACGAGGTGCCTACATTT
ATCTTTCAAATGCACCTACCAAGTTACAACATTATACATCACTCACACTTGGCATATATC
TTGCTCAAGTAAATGGTGAGTATGAATGTTAATAAGGAAATGTTCACCTCTGTCCTCTCC
GCAAATACATGAGGGATGACATTCTTTATATCTCTCCATGATTTACCATACCTGCACAAC
AACAACAACAAAATGAGCCAGTGGTATAATCTTAATGAGGTCCAAGATGTATCACTATTG
AATATTGAAAATAGAGTACCGGACTATGAGATTCTCCCTATAATTTATCGTAACTCGCTC
ATCGGACCTTTTGGGCAAATCTGAAAATGCGCGTTATTTTGGGGATTCCCTCTCCTGAGA
ATTTGGAGAGCCGCACACGGGTAGCTAACCTTTTTTGCAATTCTGGGGGCTCGGGCTTCT
CTGTTTGGGCACGTAACAATTGCCCAACTTTTCTTTTTTTTAAGTTCAACTTGCGGCCAA
ACAAACAAAATATAACAATTCCCTAACAACTTTCCCCCCCCACCAAGGTCTACACCACAT
CGGTCTCTTTTCTTTTTTACCC
GenBank Accession FR803864 [GenBank]
Graphic View Graphic view of sequence FR803864 of line 132C08
Predicted Position of Insertion Chr5:23584223 - go to primer design
BLAST e Value 2e-120
Hit Clone Code (BAC ID) MCK7
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37