SimpleSearch - Line and FST details


Line specific information

 
Line ID 133C08
Vector Used pAC161
Line Availability available as T3 set from NASC (N412704)
Segregation Analysis 50:35:35
Confirmed for Hit At3g56940
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At3g56940

Sequence (A. th genome BLAST matches underlined)
>59-K012719-022-133-C08-8409
NATTTGATCCATGTAGATCTTCCCGAACCATGAAGCCTTTACATTGGAATATAGTCCTGA
CATGATTCCTCCAGTGGCCTATGGGATCCTCCCATATACTGAAGTCTGTTATATACTCAC
GACCCTTTCGTGAGGATCAAGGAGTTTAAAGAAGCTGTAGACTAACTGCTTGGACTCTCT
CCGACAGATCTTCGTTGAGTTCCTTGAGCGGTCTTGTACTGCTGAGTTCTCTGGTTTTCT
TCTCTACAAGGAGCTTGGTCGAAGACTCATGGTGAGAATTTAAGAATATATATGGCTTTA
AGTAATACTCAAGTCTCAATTGTTATGAGTTTTCAAGTGTTGGTTGGAGCTTGATGATAC
ATTCCGAGCACACGTCCTTTATATGCGTCCTTACTTATCTTACACACCTCTGGTGACTAA
AAAGTGAATGTTTTTAAACTCTTTTAATCCCTTACCAACAAACGCTCCCACATTTTTCCT
TATAGCGATATTTACGTGTTAAGAACAATATTTTATTGCGCGCGGATGTCTCCTGAAACA
AAAAATGGGTGATCTNCAAACGAAAAANAAAAAATCCGTGCTCTCCCCTATGCTCGTATT
TCTTGNTGANNAATGTTCTGTGCCGGNNNGNNCGGNNCNCCCTTTGTNGAGGAAAAAATA
TAACTTATGAAAGAAGTCCCCTTGCCTCCTCAGGGTGTTATTTCCTCCCCCTTGAAAATG
ATGCAGATACTCGGCGGGGGTGCCGAAAACGCCCACTCTGCTTACTTTAGTAGGAAGAGG
GCCATTGTNCAAGCAACCCTACCCCTCCGCGGNCGGGGCGCCCCCTCCCCCCCCACCNAT
TTNGGTTTTGTAAAATTTCTTTCCATCTCCCTCA
GenBank Accession AL764967 [GenBank]
Graphic View Graphic view of gene At3g56940
Predicted Position of Insertion Chr3:21076856 - go to primer design
BLAST e Value 7e-92
Hit Clone Code (BAC ID) T8M16
Hit Gene Code At3g56940 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation dicarboxylate diiron protein, putative (Crd1)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details