SimpleSearch - Line and FST details


Line specific information

 
Line ID 133F03
Vector Used pAC161
Line Availability available as T3 set from NASC (N412735)
Segregation Analysis 50:21:19
Confirmed for Hit At4g20170
Parent of DUPLO pair 2550
Parent of pair(s) none

Gene hit At4g20170

 
Sequence (A. th genome BLAST matches underlined) 
>22-K012719-022-133-F03-8409
TTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGCTGGA
CAGCCGGAGAATGTATTCGCGACAGGCGTACACATGTCTCATAATCTACTAGGGAAAACA
TACCACACGGCTGAATGCAAAATCCGTTACTTCCACTACCATGGTTCGATCTCTCATCGC
CGCGAGCCTTGTCGTCAACTTTTTAACGATTCTCGAGTCGTGTTCGAGAACACTCCTTAT
GTGCTATGGGATCCTCCCTATAGTGAGTCGTCTTACTGATNGAATCTTTAAAACATTTCT
CACTAAAATCATGTGAAAACATTTCTCACTAAAATCATGTGAAAACATTTCTCAGTAAAA
TCATGTGATGTTCAATAAAAGTAAAGATCGTGACCGACATAGGAGACTAATACAGAATGC
ACAAAGACTTTTACAGGCCAAGTGTTGACCGAATCAGATACTTATTGATATTATATGTCA
CCTTCAAAAAACTTGTGACTAATATTCTAAGTCACTCAATAAACAACACATGGGAATTTG
GTTAAACGTTCAATCATTAAAATCAACAAAGTTATGAAATGTTACCTGTAANGTTCTCGC
CGGGACCATCACCCGAAATAACAAATCCGACTACTCATAGGCATCTGGTCAATAGTAAAC
TGAGAATATTCCTCCAAAGATCCCATCACAGACGAAATCGTCTCTTTCACTGGAACATGG
TAAAACCTCTCAACATCAAAGAAGAACCTTCACTTGGTCATGAATTTATCCTTATGCCAA
CAATCATTCACTATCATGAACTGATTATGATAATATCCTTCGATCCGTCTTGATCTCTAA
TATCATGTAACGTCACTCTCCCTA
GenBank Accession AL764989 [GenBank]
Graphic View Graphic view of gene At4g20170
Predicted Position of Insertion Chr4:10898502 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F1C12
Hit Gene Code At4g20170 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation glycosyltransferase family protein (DUF23)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37