SimpleSearch - Line and FST details


Line specific information

 
Line ID 134A01
Vector Used pAC161
Line Availability available as T3 set from NASC (N412769)
Segregation Analysis 120:65:43
Confirmed for Hit At5g20850
Parent of DUPLO pair 12890
Parent of pair(s) none

Gene hit At3g06345

 
Sequence (A. th genome BLAST matches underlined) 
>01-K104608-0022-134-A01-8409
CGGAAGAAGCCATTTAAATTGAAAGCCGGCCAAGGGTGATGAACGAAATGTGAACCCTTG
TCTCGCCTATGGGATCCTCCATATAGTGAGA
GenBank Accession FR803901 [GenBank]
Graphic View Graphic view of gene At3g06345
Predicted Position of Insertion Chr3:14197009 - go to primer design
BLAST e Value 1e-19
Hit Clone Code (BAC ID) F21A14
Hit Gene Code At3g06345 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation miRNA
Insertion Classification TS2TE
Confirmation Status unknown

Gene hit At5g20850

Sequence (A. th genome BLAST matches underlined) 
>01-K104607-0022-134-A01-8409
GAAAGCCGGCGAACGGTGATGAACGATATGTGAACCCTTGCTCTCGTCTATGAGATCTGA
ATCATTCTAGATCGGAACTCCCCCTATAACTCTGTGATGGAACCAGTTTCAATACCTCCT
GTTGAGCATACGGCAAAGTAAGATCACAATAACAAAATGCCGTTATAAGATGCACCAGAA
ACCAGCACCAACCTTCTATGGGATCCTCCCTATAGTGAGCCGAAGAACTAAGAAACCC
GenBank Accession FR803900 [GenBank]
Graphic View Graphic view of gene At5g20850
Predicted Position of Insertion Chr5:7071813 - go to primer design
BLAST e Value 5e-60
Hit Clone Code (BAC ID) F22D1
Hit Gene Code At5g20850 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RAS associated with diabetes protein 51
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details