SimpleSearch - Line and FST details


Line specific information

 
Line ID 134C06
Vector Used pAC161
Line Availability available as T3 set from NASC (N412798)
Segregation Analysis 50:13:11
Confirmed for Hit At5g65810
Parent of DUPLO pair 2230
Parent of pair(s) none

Gene hit At5g65810

 
Sequence (A. th genome BLAST matches underlined) 
>43-K012718-022-134-C06-8409
TTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAATTGAATACTTCCCGTTCCT
ACTACTATGGGCTTAACCTGGTCAACGAAAGGCTGAAGGCCGCGGACACTTGTCTAAATT
TATACGGCCTGTTAGTTCACTGAAAGCTTGTTCTAGTGATGAATGAAACCACACATTACA
TTCTTCATTGCAGAAAAGTGGGTATAGGCCCTGAGTCGTCCGAGACGCTAACTTGAAGCA
ATTCCAATGTCACGCACGCTATAATGCGTAGCGTGTCGAGGAGGATCCGCTTCTTGTCAC
AGACGAACTTAAAAGAGAGCGAAACATGAAGCAAGAAACTGCAACAAGCGGCTTCCAAGA
GCTTATACAAACCAGTTTGACTAGATGGGCACCGGAGGCCCTTACATGAGTACACACTAT
TATTACTGGTTTNACGACATCAAACCAGATATCTCTCCTCTCTGTTTAATACCCTTTTTT
TCCGCTATAGAAAGAAACTAAACTCCCACAAATTGTAATTCATTCTCAACGATTAGATTC
ATAATGTAACTATTTAATAAATTTGCCTCTTCTATACAGTCCGCTATGGGATCCTCCCTA
TAGTGAGCGTTTTACCCTCAAAANNNTTNANCTCCTTGCGAATTGGGGGTCCCTCCTTGG
GATCCCCCCTTTAAGGGAGGCGGTTACCCTAGNNNNNGCCCCTTGGGGAGGAGCCCATGG
CGAACCGCCCAAACAAAGCCAGTTCATGAGAGAGGTACAAATAAAAGAGCGCACGTGGAG
GAACACCTCACTGCTGGGCGAGGTGAGGTGGGTGCGTGAGGGGGAAAGAGGGCTCTACAC
ACAGGGAAGGAAGTCGGGCGTTCAGTCTAAACACAACAAAGAAAGG
GenBank Accession AL765036 [GenBank]
Graphic View Graphic view of gene At5g65810
Predicted Position of Insertion Chr5:26338183 - go to primer design
BLAST e Value 5e-93
Hit Clone Code (BAC ID) MPA24
Hit Gene Code At5g65810 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation transmembrane protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37