SimpleSearch - Line and FST details
Line specific information
| Line ID | 134E12 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N412828) |
| Segregation Analysis | 50:24:22 |
| Confirmed for Hit | At5g18290 |
| Parent of DUPLO pair | 1910 |
| Parent of pair(s) | none |
Gene hit F16F14
| Sequence (A. th genome BLAST matches underlined) | >93-K013053-022-134-E12-35St ACTTGCGTAAGGGATGACGCATANTCCACTATCCTTCGAAGACCCTTCCTCTATATAAGG AATTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTT CGGTTTAAACTATCTGAGTTGTAGTACTGTCAATATTGATTATATGTTGTAATAAATTGT TTAAAATGCAAATGATTACAGCGGTTGAGACGGACAAATACTATGCAGATTAAACCGCTT TTAATTTACCAATCATAAATTAGAATCTATAATAATATATACTAAGAAAACTGCCGTAAA CCAATCATAAACCATTTTTACATACAAATAAGATTGATCCACAACGATTTATTATCTACT TGAAAATAAAACACACTTATATTATCGATGAATTTATCTATTCTGATTGCCGTTACCATT CGAACCAAAAAATTCAGAGTATTTAGAAAATTTTAGCAAGAAAAGAAAAAGATTCCTTTA TTCGGCCAAGAATGGTGAATATAGGACGTGAGATATATTACTCCTTATATATCCGAACAT TAAATTTACAACAATAATAAAACAGGAAAGAAGGAAAGAAAAAATCCCAAATAGTAATTG CGGCAACAGCTTAGCTGGCTTATGGCGGGATTACCGGGAAAGTCAAACCAAACATTAAAA CGACGTCACTTTACCCCACACTATGGGATCCTCCCTAT |
| GenBank Accession | AL765069 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:7043976 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F16F14 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit At5g18290
| Sequence (A. th genome BLAST matches underlined) | >93-K012718-022-134-E12-8409 ATTTTTACGGTTATTGGAAACGTTCTTGGTGGTGCTATGGGATCCTCCCTATAGTGAGTC GTATTACTCAANCNANGGGATNCTCCCTATACTGATCTTGTTTACTCACGACAGATGTAC TGCCAAAGAGTGAGATAAATATCTTCCCTGTGTAATGCGTCCTACCAGACCACATCTTAA GAATACTGTACAAGGAAAGCATACACGAGCTTCACTATAGATCGTATATCCGGGTTCTAA GANGGNGNGGGGCCAGAGTGAAAGCCATGAACCCGGACAGGAGGTAAAGCATCCCTGTAC CACAAGGCAGGAAGGAATAAAAAAACGGTTCGGACCGCCCCTCCCCTCGCGCCTTAATAA GGGGCGGGGAGGCCCTACTTTCAGAAGAACCCGACGCGCGACACCGTGAACCAAAGCCGG CCGACCCGCGGCACCCACCAAGGCGCCACCGACAGCGGACGAGGAGCGACCTACCCCCTG CCCTCACCGCCAGCACGCCCCCCAGACACAACGCACAGCCAAACGCCCTCAGGCCGGCAT CGCCGCCGCCGCCCGGCGGCGCGCGCAGAAGCCGCTCGCGCGCCCGAGCCCGGCGAGGCC GTGGGGGCGAGGCCGACAGCGCCCCGCTCTACAGCAGAGCGCCATACGGACAGCCGCACG CCAGGGAAGGGGAGCGGCAGCAACCGAAGATCAAGAAGAGAGAAC |
| GenBank Accession | AL765068 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:6056301 - go to primer design |
| BLAST e Value | 7e-12 |
| Hit Clone Code (BAC ID) | MRG7 |
| Hit Gene Code | At5g18290 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Aquaporin-like superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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